RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 ROGDIQ9GZN7 287 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 SRMSQ9H3Y6 488 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 S100A14Q9HCY8 104 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 PRDM9Q9NQV7 894 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 ATP6V1HQ9UI12 483 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 BTNL2Q9UIR0 455 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 CFAP20Q9Y6A4 193 aaKnown RBP12.61□□□□□ -0.39
SLIRP-201ENST00000238688 ITPR1Q14643 2758 aa12.61□□□□□ -0.39
SLIRP-201ENST00000238688 PRSS51A0A1B0GVH4 220 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 GNG14A0A1W2PPG7 69 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 KRT87PA6NCN2 255 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 OR52A4PA6NMU1 304 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 RNASET2O00584 256 aaKnown RBP12.6□□□□□ -0.39
SLIRP-201ENST00000238688 GMNNO75496 209 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 CSF2P04141 144 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 CHRM5P08912 532 aaPredicted RBP12.6□□□□□ -0.39
SLIRP-201ENST00000238688 UMPSP11172 480 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 SLC19A1P41440 591 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 MAGEA8P43361 318 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 HNRNPKP61978 463 aaKnown RBP eCLIP12.6□□□□□ -0.39
SLIRP-201ENST00000238688 CSNK1G2P78368 415 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 RHDQ02161 417 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 CYP4F3Q08477 520 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 PDE7AQ13946 482 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 SLC5A12Q1EHB4 618 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 ADPRMQ3LIE5 342 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 SPANXN4Q5MJ08 99 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 MANEAQ5SRI9 462 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 ZNF425Q6IV72 752 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 COMMD6Q7Z4G1 85 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 NUDT13Q86X67 352 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 DHFR2Q86XF0 187 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 NRROSQ86YC3 692 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 CATSPER1Q8NEC5 780 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 RGMAQ96B86 450 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 LRGUKQ96M69 825 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 GBP5Q96PP8 586 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 PHF12Q96QT6 1004 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.6□□□□□ -0.39
SLIRP-201ENST00000238688 ZMYND15Q9H091 742 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 ALG2Q9H553 416 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 REEP4Q9H6H4 257 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 TAAR2Q9P1P5 351 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 ZNF624Q9P2J8 865 aaPredicted RBP12.6□□□□□ -0.39
SLIRP-201ENST00000238688 CPNE7Q9UBL6 633 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 SPASTQ9UBP0 616 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 MAGEL2Q9UJ55 1249 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 UNC13CQ8NB66 2214 aa12.6□□□□□ -0.39
SLIRP-201ENST00000238688 TRBV5-3A0A0A0MS03 114 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 ARHGAP10A1A4S6 786 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 PRORSD1PA6NEY8 169 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 URADA6NGE7 173 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 C2orf74A8MZ97 194 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 NME4O00746 187 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 CAPN5O15484 640 aaPredicted RBP12.59□□□□□ -0.39
SLIRP-201ENST00000238688 GPIP06744 558 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 MYF5P13349 255 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 COX7A2P14406 83 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 VHLP40337 213 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 FASLGP48023 281 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 STXBP1P61764 594 aaKnown RBP12.59□□□□□ -0.39
SLIRP-201ENST00000238688 INSM1Q01101 510 aaPredicted RBP12.59□□□□□ -0.39
SLIRP-201ENST00000238688 ILKQ13418 452 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 CCNIQ14094 377 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 HEPACAMQ14CZ8 416 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 RBBP5Q15291 538 aaKnown RBP12.59□□□□□ -0.39
SLIRP-201ENST00000238688 CMPK2Q5EBM0 449 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 PAGE3Q5JUK9 113 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 CPTPQ5TA50 214 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 HES3Q5TGS1 186 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 NANOGP8Q6NSW7 305 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 DUS1LQ6P1R4 473 aaKnown RBP12.59□□□□□ -0.39
SLIRP-201ENST00000238688 SLC30A9Q6PML9 568 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 FKBP9P1Q75LS8 142 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 RD3Q7Z3Z2 195 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 TRIML2Q8N7C3 387 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 MFSD9Q8NBP5 474 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 SLC26A7Q8TE54 656 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 RSC1A1Q92681 617 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 TSSK3Q96PN8 268 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 KCTD14Q9BQ13 255 aaPredicted RBP12.59□□□□□ -0.39
SLIRP-201ENST00000238688 EPB41L1Q9H4G0 881 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 RAD21L1Q9H4I0 556 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 NANOGQ9H9S0 305 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 EHD3Q9NZN3 535 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 SCHIP1Q9P0W5 487 aaPredicted RBP12.59□□□□□ -0.39
SLIRP-201ENST00000238688 APOBEC3BQ9UH17 382 aaKnown RBP12.59□□□□□ -0.39
SLIRP-201ENST00000238688 PLAGL1Q9UM63 463 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 SH2B3Q9UQQ2 575 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 RAXQ9Y2V3 346 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 PCDHB3Q9Y5E6 796 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 SNX13Q9Y5W8 968 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 NBEAQ8NFP9 2946 aa12.59□□□□□ -0.39
SLIRP-201ENST00000238688 TCRBV3S1A0A5B6 114 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 LILRA5A6NI73 299 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 EVPLLA8MZ36 301 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 H7BY64 318 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 RFXANKO14593 260 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 SCAMP1O15126 338 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 NDUFS4O43181 175 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms