RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 HUS1BQ8NHY5 278 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 ZNF483Q8TF39 744 aaPredicted RBP11.96□□□□□ -0.49
LSM5-201ENST00000223084 UBE2E3Q969T4 207 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 NACC2Q96BF6 587 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 TBC1D20Q96BZ9 403 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 ZBTB9Q96C00 473 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 MTFMTQ96DP5 389 aaKnown RBP11.96□□□□□ -0.49
LSM5-201ENST00000223084 FAR2Q96K12 515 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 MTERF1Q99551 399 aaKnown RBP11.96□□□□□ -0.49
LSM5-201ENST00000223084 NUDT9Q9BW91 350 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 MS4A8Q9BY19 250 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 OR51B5Q9H339 312 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 ZNF160Q9HCG1 818 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 ATP13A2Q9NQ11 1180 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 PLAAQ9Y263 795 aa11.96□□□□□ -0.49
LSM5-201ENST00000223084 RTCAO00442 366 aaKnown RBP11.95□□□□□ -0.5
LSM5-201ENST00000223084 UGDHO60701 494 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 GLRA3O75311 464 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 CLDN9O95484 217 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 HPP00738 406 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 PROCP04070 461 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 FHP07954 510 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 C8orf89P0DMQ9 161 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 COX6A1P12074 109 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 KRT4P19013 534 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 ATP5F1P24539 256 aaPredicted RBP11.95□□□□□ -0.5
LSM5-201ENST00000223084 ITGA3P26006 1051 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 CERS1P27544 350 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 PGDP52209 483 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 HERVK_113P63132 956 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 SKP1P63208 163 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 BTG2P78543 158 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 RHAGQ02094 409 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 C19orf57Q0VDD7 668 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 TRAF3Q13114 568 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 ZRSR2Q15696 482 aaKnown RBP11.95□□□□□ -0.5
LSM5-201ENST00000223084 ZNF678Q5SXM1 525 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 NIPAL1Q6NVV3 410 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 TRIM40Q6P9F5 258 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 ABHD17CQ6PCB6 329 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 TMEM205Q6UW68 189 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 ZNF793Q6ZN11 406 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 ASB18Q6ZVZ8 466 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 GALNT16Q8N428 558 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 MREGQ8N565 214 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 OR4F6Q8NGB9 312 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 TRPC4APQ8TEL6 797 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 TSLPQ969D9 159 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 TMEM237Q96Q45 408 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 OR1F2PQ96R84 312 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 NTMT1Q9BV86 223 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 SORBS1Q9BX66 1292 aaKnown RBP11.95□□□□□ -0.5
LSM5-201ENST00000223084 ERVK-6Q9BXR3 956 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 MLXIPLQ9NP71 852 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 DMRT3Q9NQL9 472 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 PRDM7Q9NQW5 492 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 GPR83Q9NYM4 423 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 PCDHGA11Q9Y5H2 935 aa11.95□□□□□ -0.5
LSM5-201ENST00000223084 LOC102723996A0A087X1L8 192 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 IGHV1-45A0A0A0MS14 117 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 NSG1A0A0A6YYJ2 146 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 MAGEB17A8MXT2 336 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 G3V2L1 256 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 H0YIV9 168 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 COPEO14579 308 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 B3GALT2O43825 422 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 PLIN3O60664 434 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 SUPT7LO94864 414 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 CELA2AP08217 269 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 RNH1P13489 461 aaKnown RBP11.94□□□□□ -0.5
LSM5-201ENST00000223084 IL10P22301 178 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 CCT5P48643 541 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 PRKAA2P54646 552 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 RPS13P62277 151 aaKnown RBP11.94□□□□□ -0.5
LSM5-201ENST00000223084 CLCQ05315 142 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 SLC18A2Q05940 514 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 AIMP2Q13155 320 aaKnown RBP11.94□□□□□ -0.5
LSM5-201ENST00000223084 ABRAXAS2Q15018 415 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 PCOLCEQ15113 449 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 LETMD1Q6P1Q0 360 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 CHSY3Q70JA7 882 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 NDUFAF7Q7L592 441 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 MILR1Q7Z6M3 343 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 ANKRD37Q7Z713 158 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 CNPY4Q8N129 248 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 PLPP5Q8NEB5 264 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 WDR20Q8TBZ3 569 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 PPP4R1Q8TF05 950 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 METTL21AQ8WXB1 218 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 CMTM7Q96FZ5 175 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 VPS50Q96JG6 964 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 CSF3RQ99062 836 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 C1QTNF3Q9BXJ4 246 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 ROPN1BQ9BZX4 212 aaPredicted RBP11.94□□□□□ -0.5
LSM5-201ENST00000223084 COPS7BQ9H9Q2 264 aaPredicted RBP11.94□□□□□ -0.5
LSM5-201ENST00000223084 ROPN1Q9HAT0 212 aaPredicted RBP11.94□□□□□ -0.5
LSM5-201ENST00000223084 LGALS13Q9UHV8 139 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 PCDHGA9Q9Y5G4 932 aaKnown RBP11.94□□□□□ -0.5
LSM5-201ENST00000223084 CFAP46Q8IYW2 2715 aa11.94□□□□□ -0.5
LSM5-201ENST00000223084 A0A088AWK7 358 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms