RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 AKAP14Q86UN6 197 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 HEATR4Q86WZ0 1026 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 RAVER1Q8IY67 606 aaKnown RBP16.56■□□□□ 0.24
USB1-201ENST00000219281 B3GNT7Q8NFL0 401 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 MRPS31Q92665 395 aaKnown RBP16.56■□□□□ 0.24
USB1-201ENST00000219281 GTPBP3Q969Y2 492 aaKnown RBP16.56■□□□□ 0.24
USB1-201ENST00000219281 CIDECQ96AQ7 238 aaPredicted RBP16.56■□□□□ 0.24
USB1-201ENST00000219281 TMEM159Q96B96 161 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 TMEM121BQ9BXQ6 578 aaPredicted RBP16.56■□□□□ 0.24
USB1-201ENST00000219281 EMILIN2Q9BXX0 1053 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 ROGDIQ9GZN7 287 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 ZBP1Q9H171 429 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 ZNF556Q9HAH1 456 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 SLC25A13Q9UJS0 675 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 MAPRE3Q9UPY8 281 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 IFT52Q9Y366 437 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 KIAA0100Q14667 2235 aaKnown RBP16.56■□□□□ 0.24
USB1-201ENST00000219281 SAP18O00422 153 aaKnown RBP16.56■□□□□ 0.24
USB1-201ENST00000219281 AP2A2O94973 939 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 MC1RQ01726 317 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 PRKCDQ05655 676 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 ASTLQ6HA08 431 aaPredicted RBP16.56■□□□□ 0.24
USB1-201ENST00000219281 DESI1Q6ICB0 168 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 LILRA6Q6PI73 481 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 METTL4Q8N3J2 472 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 ZNF784Q8NCA9 323 aaPredicted RBP16.56■□□□□ 0.24
USB1-201ENST00000219281 MYLIPQ8WY64 445 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 TXNDC15Q96J42 360 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 RIOK2Q9BVS4 552 aaKnown RBP16.56■□□□□ 0.24
USB1-201ENST00000219281 BHLHE41Q9C0J9 482 aaPredicted RBP16.56■□□□□ 0.24
USB1-201ENST00000219281 REEP4Q9H6H4 257 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 ITM2CQ9NQX7 267 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.56■□□□□ 0.24
USB1-201ENST00000219281 MAP4K5Q9Y4K4 846 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 CFAP20Q9Y6A4 193 aaKnown RBP16.56■□□□□ 0.24
USB1-201ENST00000219281 FADS2P1A8MWK0 482 aa16.55■□□□□ 0.24
USB1-201ENST00000219281 CATP04040 527 aaKnown RBP16.55■□□□□ 0.24
USB1-201ENST00000219281 ADRA2AP08913 450 aa16.55■□□□□ 0.24
USB1-201ENST00000219281 CTSAP10619 480 aa16.55■□□□□ 0.24
USB1-201ENST00000219281 PTX3P26022 381 aaPredicted RBP16.55■□□□□ 0.24
USB1-201ENST00000219281 CA8P35219 290 aa16.55■□□□□ 0.24
USB1-201ENST00000219281 CTSCP53634 463 aa16.55■□□□□ 0.24
USB1-201ENST00000219281 UGT2B15P54855 530 aa16.55■□□□□ 0.24
USB1-201ENST00000219281 POLR2LP62875 67 aaKnown RBP16.55■□□□□ 0.24
USB1-201ENST00000219281 IRF3Q14653 427 aa16.55■□□□□ 0.24
USB1-201ENST00000219281 GANABQ14697 944 aaKnown RBP16.55■□□□□ 0.24
USB1-201ENST00000219281 TMPRSS11BQ86T26 416 aa16.55■□□□□ 0.24
USB1-201ENST00000219281 OR52N2Q8NGI0 321 aa16.55■□□□□ 0.24
USB1-201ENST00000219281 OR5AK3PQ8NH89 298 aa16.55■□□□□ 0.24
USB1-201ENST00000219281 NEIL2Q969S2 332 aa16.55■□□□□ 0.24
USB1-201ENST00000219281 EFHD2Q96C19 240 aaPredicted RBP16.55■□□□□ 0.24
USB1-201ENST00000219281 CRELD1Q96HD1 420 aa16.55■□□□□ 0.24
USB1-201ENST00000219281 OR5M11Q96RB7 305 aa16.55■□□□□ 0.24
USB1-201ENST00000219281 FAM129BQ96TA1 746 aa16.55■□□□□ 0.24
USB1-201ENST00000219281 TRIM39Q9HCM9 518 aa16.55■□□□□ 0.24
USB1-201ENST00000219281 ATP6V1HQ9UI12 483 aa16.55■□□□□ 0.24
USB1-201ENST00000219281 MAFFQ9ULX9 164 aa16.55■□□□□ 0.24
USB1-201ENST00000219281 PDE4DIPQ5VU43 2346 aa16.55■□□□□ 0.24
USB1-201ENST00000219281 DOCK6Q96HP0 2047 aa16.55■□□□□ 0.24
USB1-201ENST00000219281 HAT1O14929 419 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 GRM6O15303 877 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 OXSR1O95747 527 aaPredicted RBP16.54■□□□□ 0.24
USB1-201ENST00000219281 LIMK1P53667 647 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 TSTA3Q13630 321 aaPredicted RBP16.54■□□□□ 0.24
USB1-201ENST00000219281 DMC1Q14565 340 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 BCL2A1Q16548 175 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 MED27Q6P2C8 311 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 NLGN4XQ8N0W4 816 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 OR56A3Q8NH54 315 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 THSD1Q9NS62 852 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 ACER3Q9NUN7 267 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 OBSL1O75147 1896 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 PRAMEF33A0A0G2JMD5 474 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 LEFTY2O00292 366 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 PRAMEF10O60809 474 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 MED26O95402 600 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 PTTG1O95997 202 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 ITGA2P17301 1181 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 PBLDP30039 288 aaPredicted RBP16.54■□□□□ 0.24
USB1-201ENST00000219281 SLC7A9P82251 487 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 TEKQ02763 1124 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 ZNF763Q0D2J5 394 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 EIF4HQ15056 248 aaKnown RBP16.54■□□□□ 0.24
USB1-201ENST00000219281 PTGES3Q15185 160 aaKnown RBP16.54■□□□□ 0.24
USB1-201ENST00000219281 MED22Q15528 200 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 IER5LQ5T953 404 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 SLCO4C1Q6ZQN7 724 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 RNF130Q86XS8 419 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 CYP4Z2PQ8N1L4 340 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 CLIP4Q8N3C7 705 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 RASGEF1AQ8N9B8 481 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 LMNTD1Q8N9Z9 388 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 GOT1L1Q8NHS2 421 aaPredicted RBP16.54■□□□□ 0.24
USB1-201ENST00000219281 C1GALT1Q9NS00 363 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 PEX16Q9Y5Y5 336 aa16.54■□□□□ 0.24
USB1-201ENST00000219281 A0A1W2PRU2 124 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 NPC1O15118 1278 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 KIAA0513O60268 411 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 PDHA2P29803 388 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 VIPR1P32241 457 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms