RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 C9orf64Q5T6V5 341 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 COMMD6Q7Z4G1 85 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 GALNT13Q8IUC8 556 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 OR5AR1Q8NGP9 310 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 ZNF300Q96RE9 604 aaPredicted RBP12.59□□□□□ -0.39
CTNS-201ENST00000046640 APOL4Q9BPW4 351 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 DCSTAMPQ9H295 470 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 DSN1Q9H410 356 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 MARCH7Q9H992 704 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 SIAEQ9HAT2 523 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 SPATA7Q9P0W8 599 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 TCF20Q9UGU0 1960 aaKnown RBP12.59□□□□□ -0.39
CTNS-201ENST00000046640 LINC01553A4QN01 128 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 TBC1D3BA6NDS4 549 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 RTCAO00442 366 aaKnown RBP12.59□□□□□ -0.39
CTNS-201ENST00000046640 LATO43561 262 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 OXSR1O95747 527 aaPredicted RBP12.59□□□□□ -0.39
CTNS-201ENST00000046640 SERPINB1P30740 379 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 IDH2P48735 452 aaKnown RBP12.59□□□□□ -0.39
CTNS-201ENST00000046640 CRYBA2P53672 197 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 TP53BP2Q13625 1128 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 KCNJ8Q15842 424 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 TMEM240Q5SV17 173 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 NPAS3Q8IXF0 933 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 CELF5Q8N6W0 485 aaKnown RBP12.59□□□□□ -0.39
CTNS-201ENST00000046640 OR8J2Q8NGG1 315 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 DNAJB8Q8NHS0 232 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 DNASE1L2Q92874 299 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 COQ10AQ96MF6 247 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 DYRK1BQ9Y463 629 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 TESMINQ9Y4I5 508 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 ZNF197O14709 1029 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 STATHP02808 62 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 ADRB3P13945 408 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 POU2F1P14859 743 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 CD40LGP29965 261 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 TAS2R50P59544 299 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 TAP2Q03519 686 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 C2orf80Q0P641 193 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 KCNC3Q14003 757 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 ZNF234Q14588 700 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 MAD2L1BPQ15013 274 aaPredicted RBP12.59□□□□□ -0.39
CTNS-201ENST00000046640 RGNQ15493 299 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 FAM78AQ5JUQ0 283 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 P3H2Q8IVL5 708 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 CHTF18Q8WVB6 975 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 KLK6Q92876 244 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 VPS35Q96QK1 796 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 HHIPQ96QV1 700 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 DUSP21Q9H596 190 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 MAGIXQ9H6Y5 334 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 FAM120CQ9NX05 1096 aaKnown RBP12.59□□□□□ -0.39
CTNS-201ENST00000046640 THUMPD1Q9NXG2 353 aaKnown RBP12.59□□□□□ -0.39
CTNS-201ENST00000046640 SCHIP1Q9P0W5 487 aaPredicted RBP12.59□□□□□ -0.39
CTNS-201ENST00000046640 DEC1Q9P2X7 70 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 PRKAG2Q9UGJ0 569 aa12.59□□□□□ -0.39
CTNS-201ENST00000046640 TRANK1O15050 2925 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 TSPAN11A1L157 253 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 PIPSLA2A3N6 862 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 SLC9A3R1O14745 358 aaPredicted RBP12.58□□□□□ -0.4
CTNS-201ENST00000046640 UGDHO60701 494 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 ADH1CP00326 375 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 PRNPP04156 253 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 TIA1P31483 386 aaKnown RBP eCLIP12.58□□□□□ -0.4
CTNS-201ENST00000046640 SOAT1P35610 550 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 PRSS53Q2L4Q9 553 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 RFX4Q33E94 735 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 FAM109BQ6ICB4 259 aaPredicted RBP12.58□□□□□ -0.4
CTNS-201ENST00000046640 RASGRP3Q8IV61 690 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 CLIP4Q8N3C7 705 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 VPS37AQ8NEZ2 397 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 ITPKCQ96DU7 683 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 C11orf24Q96F05 449 aaPredicted RBP12.58□□□□□ -0.4
CTNS-201ENST00000046640 VMP1Q96GC9 406 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 LGR4Q9BXB1 951 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 SLIRPQ9GZT3 109 aaKnown RBP12.58□□□□□ -0.4
CTNS-201ENST00000046640 REEP1Q9H902 201 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 MARK1Q9P0L2 795 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 C5AR2Q9P296 337 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 DKK3Q9UBP4 350 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 SLC23A2Q9UGH3 650 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 AP3M1Q9Y2T2 418 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 SNX8Q9Y5X2 465 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 NUMA1Q14980 2115 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 PCM1Q15154 2024 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 CARNS1A5YM72 827 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 AIREO43918 545 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 FGF19O95750 216 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 PCCBP05166 539 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 EPHX1P07099 455 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 ITGAMP11215 1152 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 SPNP16150 400 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 ALOX12P18054 663 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 GADD45AP24522 165 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 CRISP3P54108 245 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 KDM4DQ6B0I6 523 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 SLC44A2Q8IWA5 706 aaPredicted RBP12.58□□□□□ -0.4
CTNS-201ENST00000046640 OR8D1Q8WZ84 308 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 NECTIN3Q9NQS3 549 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 DYRK4Q9NR20 520 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms