RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 RHOJQ9H4E5 214 aa14.85□□□□□ -0.03
ERCC1-201ENST00000013807 EHD1Q9H4M9 534 aa14.85□□□□□ -0.03
ERCC1-201ENST00000013807 NECTIN3Q9NQS3 549 aa14.85□□□□□ -0.03
ERCC1-201ENST00000013807 KLHL1Q9NR64 748 aa14.85□□□□□ -0.03
ERCC1-201ENST00000013807 GPRC5BQ9NZH0 403 aa14.85□□□□□ -0.03
ERCC1-201ENST00000013807 POLQO75417 2590 aa14.84□□□□□ -0.03
ERCC1-201ENST00000013807 HCFC1P51610 2035 aa14.84□□□□□ -0.03
ERCC1-201ENST00000013807 LRIT2A6NDA9 550 aa14.84□□□□□ -0.03
ERCC1-201ENST00000013807 SYNDIG1LA6NDD5 238 aa14.84□□□□□ -0.03
ERCC1-201ENST00000013807 MAOAP21397 527 aa14.84□□□□□ -0.03
ERCC1-201ENST00000013807 HSD17B7P56937 341 aa14.84□□□□□ -0.03
ERCC1-201ENST00000013807 STXBP1P61764 594 aaKnown RBP14.84□□□□□ -0.03
ERCC1-201ENST00000013807 OC90Q02509 493 aaPredicted RBP14.84□□□□□ -0.03
ERCC1-201ENST00000013807 TGFBIQ15582 683 aa14.84□□□□□ -0.03
ERCC1-201ENST00000013807 RNFT1Q5M7Z0 435 aa14.84□□□□□ -0.03
ERCC1-201ENST00000013807 TMIGD1Q6UXZ0 262 aa14.84□□□□□ -0.03
ERCC1-201ENST00000013807 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.84□□□□□ -0.03
ERCC1-201ENST00000013807 CEP97Q8IW35 865 aa14.84□□□□□ -0.03
ERCC1-201ENST00000013807 KLHL7Q8IXQ5 586 aa14.84□□□□□ -0.03
ERCC1-201ENST00000013807 POGLUT1Q8NBL1 392 aa14.84□□□□□ -0.03
ERCC1-201ENST00000013807 FBXO36Q8NEA4 188 aa14.84□□□□□ -0.03
ERCC1-201ENST00000013807 ARMC2Q8NEN0 867 aa14.84□□□□□ -0.03
ERCC1-201ENST00000013807 B3GNT7Q8NFL0 401 aa14.84□□□□□ -0.03
ERCC1-201ENST00000013807 PHF10Q8WUB8 498 aaKnown RBP14.84□□□□□ -0.03
ERCC1-201ENST00000013807 MS4A6EQ96DS6 147 aa14.84□□□□□ -0.03
ERCC1-201ENST00000013807 WDR34Q96EX3 536 aa14.84□□□□□ -0.03
ERCC1-201ENST00000013807 VPS39Q96JC1 886 aa14.84□□□□□ -0.03
ERCC1-201ENST00000013807 DERL2Q9GZP9 239 aa14.84□□□□□ -0.03
ERCC1-201ENST00000013807 TRMT1Q9NXH9 659 aaKnown RBP14.84□□□□□ -0.03
ERCC1-201ENST00000013807 RNF14Q9UBS8 474 aa14.84□□□□□ -0.03
ERCC1-201ENST00000013807 TINAGQ9UJW2 476 aa14.84□□□□□ -0.03
ERCC1-201ENST00000013807 MEMO1Q9Y316 297 aa14.84□□□□□ -0.03
ERCC1-201ENST00000013807 ASB1Q9Y576 335 aa14.84□□□□□ -0.03
ERCC1-201ENST00000013807 SAR1BQ9Y6B6 198 aa14.84□□□□□ -0.03
ERCC1-201ENST00000013807 CCDC168Q8NDH2 2452 aa14.84□□□□□ -0.03
ERCC1-201ENST00000013807 NPEPPSL1A6NEC2 478 aa14.83□□□□□ -0.04
ERCC1-201ENST00000013807 NPIPA5E9PKD4 350 aa14.83□□□□□ -0.04
ERCC1-201ENST00000013807 FAM227AF5H4B4 570 aa14.83□□□□□ -0.04
ERCC1-201ENST00000013807 PSMD12O00232 456 aaPredicted RBP14.83□□□□□ -0.04
ERCC1-201ENST00000013807 H2AFYO75367 372 aaKnown RBP14.83□□□□□ -0.04
ERCC1-201ENST00000013807 CLEC3AO75596 197 aa14.83□□□□□ -0.04
ERCC1-201ENST00000013807 TBX6O95947 436 aaPredicted RBP14.83□□□□□ -0.04
ERCC1-201ENST00000013807 CLCN2P51788 898 aa14.83□□□□□ -0.04
ERCC1-201ENST00000013807 SMSP52788 366 aa14.83□□□□□ -0.04
ERCC1-201ENST00000013807 POU4F1Q01851 419 aa14.83□□□□□ -0.04
ERCC1-201ENST00000013807 PDIA2Q13087 525 aaKnown RBP14.83□□□□□ -0.04
ERCC1-201ENST00000013807 RUNX2Q13950 521 aa14.83□□□□□ -0.04
ERCC1-201ENST00000013807 E2F2Q14209 437 aa14.83□□□□□ -0.04
ERCC1-201ENST00000013807 FASTKD3Q14CZ7 662 aaKnown RBP14.83□□□□□ -0.04
ERCC1-201ENST00000013807 RBBP5Q15291 538 aaKnown RBP14.83□□□□□ -0.04
ERCC1-201ENST00000013807 TSNQ15631 228 aaKnown RBP14.83□□□□□ -0.04
ERCC1-201ENST00000013807 MAPKAPK3Q16644 382 aa14.83□□□□□ -0.04
ERCC1-201ENST00000013807 ANKMY2Q8IV38 441 aa14.83□□□□□ -0.04
ERCC1-201ENST00000013807 SRRM1Q8IYB3 904 aaKnown RBP14.83□□□□□ -0.04
ERCC1-201ENST00000013807 GHDCQ8N2G8 530 aa14.83□□□□□ -0.04
ERCC1-201ENST00000013807 TCAIMQ8N3R3 496 aa14.83□□□□□ -0.04
ERCC1-201ENST00000013807 ACBD4Q8NC06 268 aa14.83□□□□□ -0.04
ERCC1-201ENST00000013807 C16orf52Q8NHV5 167 aa14.83□□□□□ -0.04
ERCC1-201ENST00000013807 MAGED4Q96JG8 741 aa14.83□□□□□ -0.04
ERCC1-201ENST00000013807 QRFPRQ96P65 431 aa14.83□□□□□ -0.04
ERCC1-201ENST00000013807 DEFB126Q9BYW3 111 aa14.83□□□□□ -0.04
ERCC1-201ENST00000013807 GPAMQ9HCL2 828 aa14.83□□□□□ -0.04
ERCC1-201ENST00000013807 CTNNAL1Q9UBT7 734 aa14.83□□□□□ -0.04
ERCC1-201ENST00000013807 NPIPA1Q9UND3 350 aa14.83□□□□□ -0.04
ERCC1-201ENST00000013807 INTS1Q8N201 2190 aaKnown RBP14.83□□□□□ -0.04
ERCC1-201ENST00000013807 E9PLN8 166 aa14.82□□□□□ -0.04
ERCC1-201ENST00000013807 FCHO1O14526 889 aa14.82□□□□□ -0.04
ERCC1-201ENST00000013807 ESRRAP11474 423 aaPredicted RBP14.82□□□□□ -0.04
ERCC1-201ENST00000013807 TFEBP19484 476 aa14.82□□□□□ -0.04
ERCC1-201ENST00000013807 ELAVL4P26378 380 aaKnown RBP14.82□□□□□ -0.04
ERCC1-201ENST00000013807 HNRNPH1P31943 449 aaKnown RBP14.82□□□□□ -0.04
ERCC1-201ENST00000013807 HPDP32754 393 aaPredicted RBP14.82□□□□□ -0.04
ERCC1-201ENST00000013807 HNF4AP41235 474 aa14.82□□□□□ -0.04
ERCC1-201ENST00000013807 GDF5P43026 501 aa14.82□□□□□ -0.04
ERCC1-201ENST00000013807 ST13P50502 369 aaKnown RBP14.82□□□□□ -0.04
ERCC1-201ENST00000013807 ZNF460Q14592 562 aa14.82□□□□□ -0.04
ERCC1-201ENST00000013807 NAA30Q147X3 362 aaPredicted RBP14.82□□□□□ -0.04
ERCC1-201ENST00000013807 TOR1AIP1Q5JTV8 583 aa14.82□□□□□ -0.04
ERCC1-201ENST00000013807 DOLPP1Q86YN1 238 aa14.82□□□□□ -0.04
ERCC1-201ENST00000013807 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.82□□□□□ -0.04
ERCC1-201ENST00000013807 CYP4X1Q8N118 509 aa14.82□□□□□ -0.04
ERCC1-201ENST00000013807 OR2L5Q8NG80 312 aa14.82□□□□□ -0.04
ERCC1-201ENST00000013807 TMEM125Q96AQ2 219 aa14.82□□□□□ -0.04
ERCC1-201ENST00000013807 EGFL8Q99944 293 aa14.82□□□□□ -0.04
ERCC1-201ENST00000013807 VKORC1Q9BQB6 163 aa14.82□□□□□ -0.04
ERCC1-201ENST00000013807 KLF13Q9Y2Y9 288 aaPredicted RBP14.82□□□□□ -0.04
ERCC1-201ENST00000013807 ANKRD17O75179 2603 aaKnown RBP14.82□□□□□ -0.04
ERCC1-201ENST00000013807 F8P00451 2351 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 EFCAB8A8MWE9 144 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 KLRC4-KLRK1H3BQV0 150 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 CYR61O00622 381 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 CLDN4O14493 209 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 ADAM10O14672 748 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 TAPBPO15533 448 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 WDR47O94967 919 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 ZNF24P17028 368 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 SAT1P21673 171 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 RPL21P46778 160 aaKnown RBP14.81□□□□□ -0.04
ERCC1-201ENST00000013807 RAB38P57729 211 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 BTN3A2P78410 334 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms