RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 NckipsdQ9ESJ4 714 aa11.12□□□□□ -0.63
Sdc1-201ENSMUST00000020911 HgfacQ9R098 653 aa11.12□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Slc2a5Q9WV38 501 aa11.12□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Bag6Q9Z1R2 1154 aaKnown RBP11.12□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Aldoart1A6ZI46 419 aa11.12□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Prdm13E9PZZ1 754 aa11.12□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Dpysl2O08553 572 aaKnown RBP11.12□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Rgs7O54829 469 aa11.12□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Id1P20067 168 aa11.12□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Ccnb2P30276 398 aa11.12□□□□□ -0.63
Sdc1-201ENSMUST00000020911 CskP41241 450 aa11.12□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Acot8P58137 320 aa11.12□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Vsx2Q61412 361 aa11.12□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Med22Q62276 200 aa11.12□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Mppe1Q80XL7 396 aa11.12□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Nol6Q8R5K4 1152 aaKnown RBP11.12□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Exd2Q8VEG4 650 aaKnown RBP11.12□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Nipal2Q91WC7 383 aa11.12□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Chmp1aQ921W0 196 aa11.12□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Sntg1Q925E1 517 aa11.12□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Kif12Q9D2Z8 642 aa11.12□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Trappc4Q9ES56 219 aa11.12□□□□□ -0.63
Sdc1-201ENSMUST00000020911 PbkQ9JJ78 330 aa11.12□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Maged1Q9QYH6 775 aaKnown RBP11.12□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Lama2Q60675 3118 aaKnown RBP11.12□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Ralgapa2A3KGS3 1872 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Adh6bA0A1D5RMB0 384 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Dcaf4A0A1Y7VNZ0 532 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Gm13212B1ASQ7 799 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Vmn2r11E9Q4X4 861 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 C6E9Q6D8 931 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Gm17174M0QWQ9 212 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Pou5f1P20263 352 aaKnown RBP11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Mtf1Q07243 675 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Afg1lQ3V384 480 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Smad2Q62432 467 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Mc2rQ64326 296 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Crtc1Q68ED7 630 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 DraxinQ6PAL1 343 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 PdprQ7TSQ8 878 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 D3Ertd751eQ8BGN2 192 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Bend7Q8BSV3 434 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Gpat3Q8C0N2 438 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Rdh13Q8CEE7 334 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Ccm2lQ8VCC6 481 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Tspan10Q8VCF5 331 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Nphs2Q91X05 385 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Pcdhb16Q91Y03 802 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Nrif2Q921B4 824 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 NgrnQ99KS2 293 aaKnown RBP11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Dusp12Q9D0T2 339 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Atad1Q9D5T0 361 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Rp2Q9EPK2 347 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Trip4Q9QXN3 581 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Gm4779A0A1B0GR91 561 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Aldh3b2E9Q3E1 479 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Pfdn2O70591 154 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Mup5P11591 180 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Gnrh1P13562 90 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Tgm2P21981 686 aaKnown RBP11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Cd63P41731 238 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Apobec1P51908 229 aaKnown RBP11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Tcf7Q00417 419 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Pgap2Q3TQR0 254 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 CblbQ3TTA7 982 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Olfr867Q7TRF3 331 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 SdhaQ8K2B3 664 aaKnown RBP11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 H2afjQ8R1M2 129 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Cyp2c50Q91X77 490 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Diras1Q91Z61 198 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Ankra2Q99PE2 312 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 2410137M14RikQ9CWF0 162 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Hhipl2Q9D2G9 717 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Mgat4cQ9D306 478 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Agpat3Q9D517 376 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Zfp84Q9D654 559 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Pbld1Q9DCG6 288 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Dclk1Q9JLM8 756 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Pex11bQ9Z210 259 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Zfp236S4R299 1847 aa11.11□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Olfr239A0PK55 315 aa11.1□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Ccdc149F6V035 524 aa11.1□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Znf683I7HJS4 458 aa11.1□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Olfr55K7N6Q1 315 aa11.1□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Olfr1564K7N6V7 318 aa11.1□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Cdh9P70407 786 aa11.1□□□□□ -0.63
Sdc1-201ENSMUST00000020911 AurkaP97477 395 aa11.1□□□□□ -0.63
Sdc1-201ENSMUST00000020911 IdsQ08890 552 aa11.1□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Prss55Q14BX2 321 aa11.1□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Cyb5r2Q3KNK3 276 aa11.1□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Crhr2Q60748 411 aa11.1□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Khdrbs1Q60749 443 aaKnown RBP11.1□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Acat3Q80X81 397 aa11.1□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Dnajb13Q80Y75 316 aa11.1□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Adam30Q811Q3 732 aa11.1□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Frmd6Q8C0V9 622 aa11.1□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Nrip1Q8CBD1 1161 aa11.1□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Micu2Q8CD10 432 aa11.1□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Pla2g15Q8VEB4 412 aa11.1□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Olfr837Q8VFJ4 312 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms