RNA–Protein interactions for RNA: ENST00000641575.1

SCN1A-219, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 BASIC

Gene SCN1A, Length 12,874 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-219ENST00000641575 H7BYZ3 331 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 AOC2O75106 756 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 AK1P00568 194 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 NCF1P14598 390 aaPredicted RBP2.7□□□□□ -1.98
SCN1A-219ENST00000641575 HTR7P34969 479 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 UGT2B10P36537 528 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 TXNL4AP83876 142 aaKnown RBP2.7□□□□□ -1.98
SCN1A-219ENST00000641575 NAB2Q15742 525 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 GFOD2Q3B7J2 385 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 GLRA4Q5JXX5 417 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 VWA5B1Q5TIE3 1220 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 CNTN4Q8IWV2 1026 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 SLC15A4Q8N697 577 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 OR14K1Q8NGZ2 314 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 RFKQ969G6 155 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 TAAR8Q969N4 342 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 ZNF669Q96BR6 464 aaPredicted RBP2.7□□□□□ -1.98
SCN1A-219ENST00000641575 C1QTNF3Q9BXJ4 246 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.7□□□□□ -1.98
SCN1A-219ENST00000641575 TMEM98Q9Y2Y6 226 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 CRB1P82279 1406 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 GREB1LQ9C091 1923 aaPredicted RBP2.7□□□□□ -1.98
SCN1A-219ENST00000641575 AGAP14A8MT82 685 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 ADAM10O14672 748 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 UBDO15205 165 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 B4GAT1O43505 415 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 ANGPTL7O43827 346 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 ATE1O95260 518 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 SLC16A2P36021 539 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 PKNOX1P55347 436 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 TAS2R41P59536 307 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 UBE2G2P60604 165 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 ERVK-16P61578 105 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 CD83Q01151 205 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 GPRC6AQ5T6X5 926 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 B3GNTL1Q67FW5 361 aaPredicted RBP2.7□□□□□ -1.98
SCN1A-219ENST00000641575 PLEKHG7Q6ZR37 379 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 ADGRF2Q8IZF7 708 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 C12orf45Q8N5I9 185 aaPredicted RBP2.7□□□□□ -1.98
SCN1A-219ENST00000641575 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.7□□□□□ -1.98
SCN1A-219ENST00000641575 ZSWIM2Q8NEG5 633 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 C3orf49Q96BT1 292 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 MCEEQ96PE7 176 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 SYT3Q9BQG1 590 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 AARSD1Q9BTE6 412 aaKnown RBP2.7□□□□□ -1.98
SCN1A-219ENST00000641575 DUSP16Q9BY84 665 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 TMLHEQ9NVH6 421 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 TAS2R3Q9NYW6 316 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 SIX4Q9UIU6 781 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 ZNF223Q9UK11 482 aaPredicted RBP2.7□□□□□ -1.98
SCN1A-219ENST00000641575 HS3ST4Q9Y661 456 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 ANKRD26Q9UPS8 1709 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 SPHKAPQ2M3C7 1700 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 A0A0A6YYJ9 748 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 DHRS12A0PJE2 317 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 OR6C68A6NDL8 312 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 GLTPD2A6NH11 291 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 HEXBP07686 556 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 ITGA2BP08514 1039 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 ZNF28P17035 718 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 GLRBP48167 497 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 RRAS2P62070 204 aaPredicted RBP2.7□□□□□ -1.98
SCN1A-219ENST00000641575 TSPAN5P62079 268 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 CSTF1Q05048 431 aaKnown RBP2.7□□□□□ -1.98
SCN1A-219ENST00000641575 NADK2Q4G0N4 442 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 CMPK2Q5EBM0 449 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 OVOS1Q6IE37 1185 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 GLT6D1Q7Z4J2 308 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 METTL4Q8N3J2 472 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 OR1J2Q8NGS2 313 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 LRIG1Q96JA1 1093 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 MBOAT4Q96T53 435 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 TIMM29Q9BSF4 260 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 PBDC1Q9BVG4 233 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 SFXN1Q9H9B4 322 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 ANKEF1Q9NU02 776 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 UFSP2Q9NUQ7 469 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 HIF1ANQ9NWT6 349 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 KIAA1456Q9P272 454 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 MALT1Q9UDY8 824 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 IL20RAQ9UHF4 553 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 MROH1Q8NDA8 1641 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 TTC24A2A3L6 582 aaPredicted RBP2.7□□□□□ -1.98
SCN1A-219ENST00000641575 H0Y858 1186 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 AZIN1O14977 448 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 FAM189A1O60320 539 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 IL5P05113 134 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 IL7P13232 177 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 BMP1P13497 986 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 CAP2P40123 477 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 THBS3P49746 956 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 RAB4BP61018 213 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 CYP4F8P98187 520 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 PRKCEQ02156 737 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 ASTE1Q2TB18 679 aaPredicted RBP2.7□□□□□ -1.98
SCN1A-219ENST00000641575 ZNF829Q3KNS6 432 aaPredicted RBP2.7□□□□□ -1.98
SCN1A-219ENST00000641575 NOMO2Q5JPE7 1267 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 TMEM268Q5VZI3 342 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 SFXN4Q6P4A7 337 aa2.7□□□□□ -1.98
SCN1A-219ENST00000641575 DPY19L3Q6ZPD9 716 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms