RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 PAGE3Q5JUK9 113 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 SPANXN4Q5MJ08 99 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 ARMC6Q6NXE6 501 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 C8orf82Q6P1X6 216 aaPredicted RBP12.51□□□□□ -0.41
PHGDH-221ENST00000641573 CYB5D1Q6P9G0 228 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 SLC2A7Q6PXP3 512 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 SPESP1Q6UW49 350 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 OOSP2Q86WS3 158 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 RIMKLAQ8IXN7 391 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 FBXW8Q8N3Y1 598 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 GFM2Q969S9 779 aaKnown RBP12.51□□□□□ -0.41
PHGDH-221ENST00000641573 HOPXQ9BPY8 73 aaPredicted RBP12.51□□□□□ -0.41
PHGDH-221ENST00000641573 UCK1Q9HA47 277 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 ANKMY1Q9P2S6 941 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 SLC7A8Q9UHI5 535 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 MCM8Q9UJA3 840 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 PCDHGA4Q9Y5G9 962 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 KALRNO60229 2985 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 A0A0J9YY10 115 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 GNG14A0A1W2PPG7 69 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 OR2A25A4D2G3 310 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 NDUFS4O43181 175 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 SH3BP5O60239 455 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 PGRP06401 933 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 KLK1P06870 262 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 TYRP1P17643 537 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 MAGP20916 626 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 S100A3P33764 101 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 RXRGP48443 463 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 MTTPP55157 894 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 C21orf58P58505 322 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 RPS15AP62244 130 aaKnown RBP12.5□□□□□ -0.41
PHGDH-221ENST00000641573 CYP4F3Q08477 520 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 BNIP3Q12983 259 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 SHBQ15464 509 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 HKDC1Q2TB90 917 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 PGS1Q32NB8 556 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 TRMT5Q32P41 509 aaKnown RBP12.5□□□□□ -0.41
PHGDH-221ENST00000641573 C14orf28Q4W4Y0 310 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 WASHC2DQ5SRD0 308 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 FBXW10Q5XX13 1052 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 FCRL6Q6DN72 434 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 PRMT9Q6P2P2 845 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 FIGLAQ6QHK4 219 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 NAXDQ8IW45 347 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 SLC25A45Q8N413 288 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 DPP10Q8N608 796 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 SLC13A3Q8WWT9 602 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 RSC1A1Q92681 617 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 RGMAQ96B86 450 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 TESCQ96BS2 214 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 LRRC58Q96CX6 371 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 ELF4Q99607 663 aaPredicted RBP12.5□□□□□ -0.41
PHGDH-221ENST00000641573 SLC38A3Q99624 504 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 GPATCH1Q9BRR8 931 aaKnown RBP12.5□□□□□ -0.41
PHGDH-221ENST00000641573 CENPKQ9BS16 269 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 SORBS1Q9BX66 1292 aaKnown RBP12.5□□□□□ -0.41
PHGDH-221ENST00000641573 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.5□□□□□ -0.41
PHGDH-221ENST00000641573 DENND2DQ9H6A0 471 aaPredicted RBP12.5□□□□□ -0.41
PHGDH-221ENST00000641573 CAPN10Q9HC96 672 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 DNAAF2Q9NVR5 837 aaKnown RBP12.5□□□□□ -0.41
PHGDH-221ENST00000641573 ADA2Q9NZK5 511 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 PACSIN3Q9UKS6 424 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 MAPRE3Q9UPY8 281 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 CSNK1G3Q9Y6M4 447 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 AP1M2Q9Y6Q5 423 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 PCDH15Q96QU1 1955 aa12.5□□□□□ -0.41
PHGDH-221ENST00000641573 PCM1Q15154 2024 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 LRIT2A6NDA9 550 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 LILRA5A6NI73 299 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 FXYD1O00168 92 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 RTCAO00442 366 aaKnown RBP12.49□□□□□ -0.41
PHGDH-221ENST00000641573 PLPP1O14494 284 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 MGRN1O60291 552 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 SORBS2O94875 1100 aaKnown RBP12.49□□□□□ -0.41
PHGDH-221ENST00000641573 UBXN7O94888 489 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 KLHL18O94889 574 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 STATHP02808 62 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 GBAP04062 536 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 COX7A2P14406 83 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 HNRNPH1P31943 449 aaKnown RBP12.49□□□□□ -0.41
PHGDH-221ENST00000641573 BSGP35613 385 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 HPCAL1P37235 193 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 LSSP48449 732 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 ARRB1P49407 418 aaPredicted RBP12.49□□□□□ -0.41
PHGDH-221ENST00000641573 FOXM1Q08050 763 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 ZNF763Q0D2J5 394 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 PWP1Q13610 501 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 CAPRIN1Q14444 709 aaKnown RBP12.49□□□□□ -0.41
PHGDH-221ENST00000641573 UGT8Q16880 541 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 TMEM35AQ53FP2 167 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 PIGGQ5H8A4 983 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 TOR1AIP1Q5JTV8 583 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 C6orf163Q5TEZ5 329 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 FBXO42Q6P3S6 717 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 KLHL35Q6PF15 583 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 PAGE2Q7Z2X7 111 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 NET1Q7Z628 596 aaPredicted RBP12.49□□□□□ -0.41
PHGDH-221ENST00000641573 UBE3DQ7Z6J8 389 aa12.49□□□□□ -0.41
PHGDH-221ENST00000641573 DHDDSQ86SQ9 333 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms