RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 ZFHX2Q9C0A1 2572 aaPredicted RBP6.41□□□□□ -1.38
UPF3B-205ENST00000636792 CNOT1A5YKK6 2376 aaKnown RBP6.4□□□□□ -1.38
UPF3B-205ENST00000636792 DMDP11532 3685 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 KNTC1P50748 2209 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 SPAARA0A1B0GVQ0 90 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 LRRC14BA6NHZ5 514 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 H0YIG0 161 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 H3BMH7 237 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 SLC28A1O00337 649 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 UBFD1O14562 309 aaKnown RBP6.4□□□□□ -1.38
UPF3B-205ENST00000636792 PCDH17O14917 1159 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 POLR1CO15160 346 aaPredicted RBP6.4□□□□□ -1.38
UPF3B-205ENST00000636792 HDAC3O15379 428 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 NVLO15381 856 aaKnown RBP6.4□□□□□ -1.38
UPF3B-205ENST00000636792 RGS14O43566 566 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 OR1F1O43749 312 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 KIF1CO43896 1103 aaKnown RBP6.4□□□□□ -1.38
UPF3B-205ENST00000636792 EDF1O60869 148 aaKnown RBP6.4□□□□□ -1.38
UPF3B-205ENST00000636792 CTSVO60911 334 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 CPNE3O75131 537 aaKnown RBP6.4□□□□□ -1.38
UPF3B-205ENST00000636792 OR4F21O95013 312 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 SCELO95171 688 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 ONECUT2O95948 504 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 CAPN1P07384 714 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 PIM1P11309 404 aaPredicted RBP6.4□□□□□ -1.38
UPF3B-205ENST00000636792 MYF5P13349 255 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 DDX5P17844 614 aaKnown RBP6.4□□□□□ -1.38
UPF3B-205ENST00000636792 BGNP21810 368 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 IL10P22301 178 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 PTX3P26022 381 aaPredicted RBP6.4□□□□□ -1.38
UPF3B-205ENST00000636792 BCL6P41182 706 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 ID4P47928 161 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 PPP1CAP62136 330 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 C16orf72Q14CZ0 275 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 RTP5Q14D33 572 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 ZRSR2Q15696 482 aaKnown RBP6.4□□□□□ -1.38
UPF3B-205ENST00000636792 ZIC1Q15915 447 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 CPSF6Q16630 551 aaKnown RBP eCLIP6.4□□□□□ -1.382e-11■■■■□ 23.1
UPF3B-205ENST00000636792 C18orf21Q32NC0 220 aaPredicted RBP6.4□□□□□ -1.38
UPF3B-205ENST00000636792 FBXO48Q5FWF7 155 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 XKR7Q5GH72 579 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 SH2D4BQ5SQS7 431 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 DCAF12Q5T6F0 453 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 KHDRBS2Q5VWX1 349 aaKnown RBP6.4□□□□□ -1.38
UPF3B-205ENST00000636792 RHBDD2Q6NTF9 364 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 GALNT18Q6P9A2 607 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 TRIM40Q6P9F5 258 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 ZCCHC23Q6ZST2 131 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 PAGE2Q7Z2X7 111 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 B3GNT8Q7Z7M8 397 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 SYVN1Q86TM6 617 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 SLCO6A1Q86UG4 719 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 TRIM73Q86UV7 250 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 MYLK4Q86YV6 388 aaPredicted RBP6.4□□□□□ -1.38
UPF3B-205ENST00000636792 MCATQ8IVS2 390 aaKnown RBP6.4□□□□□ -1.38
UPF3B-205ENST00000636792 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.4□□□□□ -1.38
UPF3B-205ENST00000636792 C2orf73Q8N5S3 287 aaPredicted RBP6.4□□□□□ -1.38
UPF3B-205ENST00000636792 CSNK1A1LQ8N752 337 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 CDYL2Q8N8U2 506 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 OR2L5Q8NG80 312 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 HUS1BQ8NHY5 278 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 CREB3L4Q8TEY5 395 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 ZNF473Q8WTR7 871 aaKnown RBP6.4□□□□□ -1.38
UPF3B-205ENST00000636792 SLC13A3Q8WWT9 602 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 SELENOMQ8WWX9 145 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 CCT6BQ92526 530 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 ESAMQ96AP7 390 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 FKBP10Q96AY3 582 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 MAELQ96JY0 434 aaKnown RBP6.4□□□□□ -1.38
UPF3B-205ENST00000636792 QRFPRQ96P65 431 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 KCNC2Q96PR1 638 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 TAAR9Q96RI9 348 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 SORT1Q99523 831 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 TBCDQ9BTW9 1192 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 NPLQ9BXD5 320 aaPredicted RBP6.4□□□□□ -1.38
UPF3B-205ENST00000636792 MS4A8Q9BY19 250 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 POLR1BQ9H9Y6 1135 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 DMRT3Q9NQL9 472 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 AHSPQ9NZD4 102 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 TMEM9Q9P0T7 183 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 KLHL3Q9UH77 587 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 ZNF225Q9UK10 706 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 WBP11Q9Y2W2 641 aaKnown RBP6.4□□□□□ -1.38
UPF3B-205ENST00000636792 LOXL2Q9Y4K0 774 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 TRAF6Q9Y4K3 522 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 NEUROG3Q9Y4Z2 214 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 DNAJC15Q9Y5T4 150 aa6.4□□□□□ -1.38
UPF3B-205ENST00000636792 LAMA1P25391 3075 aa6.4□□□□□ -1.39
UPF3B-205ENST00000636792 A0A1B0GX78 115 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 EFCAB7A8K855 629 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 TMEM150CB9EJG8 249 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 H0YGG7 62 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 MANBAO00462 879 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 DSCR3O14972 297 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 NDUFS4O43181 175 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 PRAMEF4O60810 478 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 GUCY1B2O75343 617 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 OR2B3O76000 313 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 NSA2O95478 260 aaKnown RBP6.39□□□□□ -1.39
UPF3B-205ENST00000636792 CHRNGP07510 517 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms