RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 RAB8AP61006 207 aa17.32■□□□□ 0.36
CLN6-214ENST00000636314 OLR1P78380 273 aa17.32■□□□□ 0.36
CLN6-214ENST00000636314 UAP1Q16222 522 aaPredicted RBP17.32■□□□□ 0.36
CLN6-214ENST00000636314 FBXO48Q5FWF7 155 aa17.32■□□□□ 0.36
CLN6-214ENST00000636314 TOR1AIP1Q5JTV8 583 aa17.32■□□□□ 0.36
CLN6-214ENST00000636314 CPEB2Q7Z5Q1 589 aaKnown RBP17.32■□□□□ 0.36
CLN6-214ENST00000636314 CTAGE6Q86UF2 777 aa17.32■□□□□ 0.36
CLN6-214ENST00000636314 CTAGE4Q8IX94 777 aa17.32■□□□□ 0.36
CLN6-214ENST00000636314 KRT78Q8N1N4 520 aa17.32■□□□□ 0.36
CLN6-214ENST00000636314 SIRT6Q8N6T7 355 aa17.32■□□□□ 0.36
CLN6-214ENST00000636314 SNX31Q8N9S9 440 aa17.32■□□□□ 0.36
CLN6-214ENST00000636314 NOA1Q8NC60 698 aaKnown RBP17.32■□□□□ 0.36
CLN6-214ENST00000636314 ST6GALNAC3Q8NDV1 305 aa17.32■□□□□ 0.36
CLN6-214ENST00000636314 TTLQ8NG68 377 aa17.32■□□□□ 0.36
CLN6-214ENST00000636314 DNAJB14Q8TBM8 379 aa17.32■□□□□ 0.36
CLN6-214ENST00000636314 STAG3L4Q8TBR4 150 aa17.32■□□□□ 0.36
CLN6-214ENST00000636314 UTP15Q8TED0 518 aaKnown RBP17.32■□□□□ 0.36
CLN6-214ENST00000636314 CYTH2Q99418 400 aa17.32■□□□□ 0.36
CLN6-214ENST00000636314 ALG9Q9H6U8 611 aa17.32■□□□□ 0.36
CLN6-214ENST00000636314 NMRAL1Q9HBL8 299 aa17.32■□□□□ 0.36
CLN6-214ENST00000636314 IGHV3-20A0A0C4DH32 117 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 ARHGAP10A1A4S6 786 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 SUPT3HB4E1H0 165 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 SUPT3HO75486 399 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 STK16O75716 305 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 SERPINA6P08185 405 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 LTA4HP09960 611 aaKnown RBP17.31■□□□□ 0.36
CLN6-214ENST00000636314 JAK1P23458 1154 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 GSTM2P28161 218 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 SOX11P35716 441 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 PER3P56645 1201 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 STXBP1P61764 594 aaKnown RBP17.31■□□□□ 0.36
CLN6-214ENST00000636314 BMPR2Q13873 1038 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 ABRAXAS2Q15018 415 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 PDK4Q16654 411 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 TMIGD1Q6UXZ0 262 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 ANKRD37Q7Z713 158 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 SLC34A3Q8N130 599 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 CCT6BQ92526 530 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 PSMF1Q92530 271 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 ESAMQ96AP7 390 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 TBC1D20Q96BZ9 403 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 LMF1Q96S06 567 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 TSPYL1Q9H0U9 437 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 LANCL2Q9NS86 450 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 NINJ2Q9NZG7 142 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 NUDT4Q9NZJ9 180 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 DMGDHQ9UI17 866 aaKnown RBP17.31■□□□□ 0.36
CLN6-214ENST00000636314 SCN2AQ99250 2005 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 CSMD1Q96PZ7 3565 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 SVILO95425 2214 aa17.31■□□□□ 0.36
CLN6-214ENST00000636314 DYTNA2CJ06 578 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 OR2W5A6NFC9 320 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 LRRTM2O43300 516 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 CHST10O43529 356 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 CCNT2O60583 730 aaKnown RBP17.3■□□□□ 0.36
CLN6-214ENST00000636314 FHP07954 510 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 ITGAMP11215 1152 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 ARG2P78540 354 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 RHAGQ02094 409 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 HYAL2Q12891 473 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 DLG1Q12959 904 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 NAA30Q147X3 362 aaPredicted RBP17.3■□□□□ 0.36
CLN6-214ENST00000636314 ZNF169Q14929 603 aaPredicted RBP17.3■□□□□ 0.36
CLN6-214ENST00000636314 TLR1Q15399 786 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 NSDHLQ15738 373 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 BTBD16Q32M84 506 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 MROH9Q5TGP6 573 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 LRRC70Q7Z2Q7 622 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 CCDC91Q7Z6B0 441 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 CREB3L4Q8TEY5 395 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 IFT81Q8WYA0 676 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 GAL3ST3Q96A11 431 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 MARVELD3Q96A59 401 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 IMMP1LQ96LU5 166 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 PHF12Q96QT6 1004 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 FMO2Q99518 471 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 BARD1Q99728 777 aaKnown RBP17.3■□□□□ 0.36
CLN6-214ENST00000636314 PITHD1Q9GZP4 211 aaPredicted RBP17.3■□□□□ 0.36
CLN6-214ENST00000636314 EHD1Q9H4M9 534 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 KLHL31Q9H511 634 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 ACSS3Q9H6R3 686 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 PTBP2Q9UKA9 531 aaKnown RBP17.3■□□□□ 0.36
CLN6-214ENST00000636314 OSGIN2Q9Y236 505 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 ACOT9Q9Y305 439 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 POLEQ07864 2286 aa17.3■□□□□ 0.36
CLN6-214ENST00000636314 CNTRLQ7Z7A1 2325 aa17.29■□□□□ 0.36
CLN6-214ENST00000636314 A0A087X1B8 175 aa17.29■□□□□ 0.36
CLN6-214ENST00000636314 MAGEB17A8MXT2 336 aa17.29■□□□□ 0.36
CLN6-214ENST00000636314 PSMD12O00232 456 aaPredicted RBP17.29■□□□□ 0.36
CLN6-214ENST00000636314 KERAO60938 352 aa17.29■□□□□ 0.36
CLN6-214ENST00000636314 ELAVL4P26378 380 aaKnown RBP17.29■□□□□ 0.36
CLN6-214ENST00000636314 TSFMP43897 325 aaKnown RBP17.29■□□□□ 0.36
CLN6-214ENST00000636314 GLE1Q53GS7 698 aaKnown RBP17.29■□□□□ 0.36
CLN6-214ENST00000636314 XKR6Q5GH73 641 aa17.29■□□□□ 0.36
CLN6-214ENST00000636314 B3GNTL1Q67FW5 361 aaPredicted RBP17.29■□□□□ 0.36
CLN6-214ENST00000636314 PLAG1Q6DJT9 500 aa17.29■□□□□ 0.36
CLN6-214ENST00000636314 ISCA2Q86U28 154 aa17.29■□□□□ 0.36
CLN6-214ENST00000636314 RELL1Q8IUW5 271 aa17.29■□□□□ 0.36
CLN6-214ENST00000636314 PLPP5Q8NEB5 264 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms