RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 VWA2Q5GFL6 755 aa13.96□□□□□ -0.17
CDC42BPB-209ENST00000634889 BEND6Q5SZJ8 279 aaPredicted RBP13.96□□□□□ -0.17
CDC42BPB-209ENST00000634889 ADNP2Q6IQ32 1131 aa13.96□□□□□ -0.17
CDC42BPB-209ENST00000634889 TRIM40Q6P9F5 258 aa13.96□□□□□ -0.17
CDC42BPB-209ENST00000634889 MED25Q71SY5 747 aa13.96□□□□□ -0.17
CDC42BPB-209ENST00000634889 MRGPREQ86SM8 312 aa13.96□□□□□ -0.17
CDC42BPB-209ENST00000634889 APLFQ8IW19 511 aaPredicted RBP13.96□□□□□ -0.17
CDC42BPB-209ENST00000634889 ZC3H7AQ8IWR0 971 aaKnown RBP13.96□□□□□ -0.17
CDC42BPB-209ENST00000634889 LSM14AQ8ND56 463 aaKnown RBP13.96□□□□□ -0.17
CDC42BPB-209ENST00000634889 SRFBP1Q8NEF9 429 aaKnown RBP13.96□□□□□ -0.17
CDC42BPB-209ENST00000634889 OR51Q1Q8NH59 317 aa13.96□□□□□ -0.17
CDC42BPB-209ENST00000634889 PPP4R1Q8TF05 950 aa13.96□□□□□ -0.17
CDC42BPB-209ENST00000634889 EXTL1Q92935 676 aa13.96□□□□□ -0.17
CDC42BPB-209ENST00000634889 CMTM7Q96FZ5 175 aa13.96□□□□□ -0.17
CDC42BPB-209ENST00000634889 FAR2Q96K12 515 aa13.96□□□□□ -0.17
CDC42BPB-209ENST00000634889 OR1F2PQ96R84 312 aa13.96□□□□□ -0.17
CDC42BPB-209ENST00000634889 CRB3Q9BUF7 120 aa13.96□□□□□ -0.17
CDC42BPB-209ENST00000634889 YIPF2Q9BWQ6 316 aa13.96□□□□□ -0.17
CDC42BPB-209ENST00000634889 MS4A8Q9BY19 250 aa13.96□□□□□ -0.17
CDC42BPB-209ENST00000634889 AICDAQ9GZX7 198 aa13.96□□□□□ -0.17
CDC42BPB-209ENST00000634889 KLHL31Q9H511 634 aa13.96□□□□□ -0.17
CDC42BPB-209ENST00000634889 PLLPQ9Y342 182 aa13.96□□□□□ -0.17
CDC42BPB-209ENST00000634889 RNF11Q9Y3C5 154 aa13.96□□□□□ -0.17
CDC42BPB-209ENST00000634889 KCNMB2Q9Y691 235 aa13.96□□□□□ -0.17
CDC42BPB-209ENST00000634889 NUP210LQ5VU65 1888 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 C4orf51C9J302 202 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 FOXE1O00358 373 aaPredicted RBP13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 BMP10O95393 424 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 CPA3P15088 417 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 OTX2P32243 289 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 XCR1P46094 333 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 ARFIP1P53367 373 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 RRADP55042 308 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 FOXL2P58012 376 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 DNAJB13P59910 316 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 RBBP7Q16576 425 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 LINC00303Q3SY05 128 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 UNC50Q53HI1 259 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 CEP85LQ5SZL2 805 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 CHSY3Q70JA7 882 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 PPP1R32Q7Z5V6 425 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 MILR1Q7Z6M3 343 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 TMEM102Q8N9M5 508 aaPredicted RBP13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 CCDC63Q8NA47 563 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 MYRIPQ8NFW9 859 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 OR4F6Q8NGB9 312 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 HUS1BQ8NHY5 278 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 WDR20Q8TBZ3 569 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 PGM2Q96G03 612 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 VPS50Q96JG6 964 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 KCNC2Q96PR1 638 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 CDK15Q96Q40 435 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 ZNF382Q96SR6 550 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 ARHGAP9Q9BRR9 750 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 NPLQ9BXD5 320 aaPredicted RBP13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 DMRT3Q9NQL9 472 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 PSD3Q9NYI0 1048 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 HCN3Q9P1Z3 774 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 C3orf18Q9UK00 162 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 PPT2Q9UMR5 302 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 CCDC88CQ9P219 2028 aa13.95□□□□□ -0.18
CDC42BPB-209ENST00000634889 ZNF860A6NHJ4 632 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 IDSB3KWA1 339 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 H3BQF6 201 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 AGPSO00116 658 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 PEX12O00623 359 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 FFAR3O14843 346 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 ATXN7O15265 892 aaPredicted RBP13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 GPR42O15529 346 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 TSFMP43897 325 aaKnown RBP13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 CDH13P55290 713 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 BTN3A2P78410 334 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 LCP2Q13094 533 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 ZRSR2Q15696 482 aaKnown RBP13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 TNFAIP8L3Q5GJ75 292 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 KHDRBS2Q5VWX1 349 aaKnown RBP13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 FRG2Q64ET8 278 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 LETMD1Q6P1Q0 360 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 ABHD17CQ6PCB6 329 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 SHISA6Q6ZSJ9 500 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 RPS27LQ71UM5 84 aaKnown RBP13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 TRPC4APQ8TEL6 797 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 FER1L6-AS2Q96M78 137 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 FRG2BQ96QU4 278 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 F2RL3Q96RI0 385 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 SERINC2Q96SA4 455 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 CENPKQ9BS16 269 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 ROGDIQ9GZN7 287 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 ADNPQ9H2P0 1102 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 SSU72Q9NP77 194 aaKnown RBP13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 OXSMQ9NWU1 459 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 TRPS1Q9UHF7 1281 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 TUBD1Q9UJT1 453 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 MKL2Q9ULH7 1088 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 HS3ST3B1Q9Y662 390 aa13.94□□□□□ -0.18
CDC42BPB-209ENST00000634889 MAGEB17A8MXT2 336 aa13.93□□□□□ -0.18
CDC42BPB-209ENST00000634889 SOCS6O14544 535 aa13.93□□□□□ -0.18
CDC42BPB-209ENST00000634889 CHST10O43529 356 aa13.93□□□□□ -0.18
CDC42BPB-209ENST00000634889 B3GALT2O43825 422 aa13.93□□□□□ -0.18
CDC42BPB-209ENST00000634889 TGFB1P01137 390 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms