RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 RAP2AP10114 183 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 COX7A2P14406 83 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 NCK1P16333 377 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 DDX5P17844 614 aaKnown RBP6.87□□□□□ -1.31
BRCA1-230ENST00000634433 IGFBP4P22692 258 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 PPIBP23284 216 aaKnown RBP6.87□□□□□ -1.31
BRCA1-230ENST00000634433 SERPINB1P30740 379 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 TLX1P31314 330 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-230ENST00000634433 KIR2DL1P43626 348 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-230ENST00000634433 MAPK10P53779 464 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 TAS2R38P59533 333 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 DMPKQ09013 629 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 ABHD18Q0P651 414 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 TSTA3Q13630 321 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-230ENST00000634433 SLBPQ14493 270 aaKnown RBP eCLIP6.87□□□□□ -1.31
BRCA1-230ENST00000634433 ATP6AP1Q15904 470 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 PRAMEF14Q5SWL7 426 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 PRAMEF13Q5VWM6 474 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 HMBOX1Q6NT76 420 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 R3HCC1LQ7Z5L2 792 aaKnown RBP6.87□□□□□ -1.31
BRCA1-230ENST00000634433 MICU2Q8IYU8 434 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 OR6C4Q8NGE1 309 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 OR10A6Q8NH74 314 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 OR5K2Q8NHB8 316 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 HUS1BQ8NHY5 278 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 GABRG3Q99928 467 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 ZPBPQ9BS86 351 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 C1QTNF2Q9BXJ5 285 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 PITHD1Q9GZP4 211 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-230ENST00000634433 FBXL12Q9NXK8 326 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 AHSPQ9NZD4 102 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 CLEC1BQ9P126 229 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 NCKAP1Q9Y2A7 1128 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 ZFC3H1O60293 1989 aaKnown RBP6.87□□□□□ -1.31
BRCA1-230ENST00000634433 RNF103-CHMP3A0A140T963 221 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 KRT87PA6NCN2 255 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 MAGEB17A8MXT2 336 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 TMEM229AB2RXF0 380 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 KDM1AO60341 852 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 DEAF1O75398 565 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-230ENST00000634433 RETP07949 1114 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 CELA3AP09093 270 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 SLC35G4P0C7Q5 338 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 IL1RNP18510 177 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 HRH2P25021 359 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 TACR1P25103 407 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 PTX3P26022 381 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-230ENST00000634433 ADH7P40394 386 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 SCAND1P57086 179 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 SELPLGQ14242 412 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 SLC9A5Q14940 896 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 SLC44A4Q53GD3 710 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 CPTPQ5TA50 214 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 ERICH5Q6P6B1 374 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 GALNT18Q6P9A2 607 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 CAMKMTQ7Z624 323 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 C17orf64Q86WR6 236 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 LRRC56Q8IYG6 542 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-230ENST00000634433 DTWD1Q8N5C7 304 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 MFSD2AQ8NA29 543 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 NANOS1Q8WY41 292 aaKnown RBP6.87□□□□□ -1.31
BRCA1-230ENST00000634433 SNX19Q92543 992 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 FIG4Q92562 907 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 FOXJ1Q92949 421 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 FAM162AQ96A26 154 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 CIB1Q99828 191 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 CPPED1Q9BRF8 314 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-230ENST00000634433 TIMM29Q9BSF4 260 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 CHID1Q9BWS9 393 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 FAM192AQ9GZU8 254 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 RPF2Q9H7B2 306 aaKnown RBP6.87□□□□□ -1.31
BRCA1-230ENST00000634433 C8orf33Q9H7E9 229 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-230ENST00000634433 KAT8Q9H7Z6 458 aaKnown RBP6.87□□□□□ -1.31
BRCA1-230ENST00000634433 PELI2Q9HAT8 420 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 PREBQ9HCU5 417 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 SERHLQ9NQF3 203 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 ATAD3AQ9NVI7 634 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 BTNL2Q9UIR0 455 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 MTCH2Q9Y6C9 303 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 ATG2AQ2TAZ0 1938 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 GNG14A0A1W2PPG7 69 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 PIPSLA2A3N6 862 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 DPPA5A6NC42 116 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 CXCR6O00574 342 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 FPGTO14772 594 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 SCAMP2O15127 329 aaKnown RBP6.86□□□□□ -1.31
BRCA1-230ENST00000634433 PLRG1O43660 514 aaKnown RBP6.86□□□□□ -1.31
BRCA1-230ENST00000634433 LRATO95237 230 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 TNFAIP8O95379 198 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 FAM58BPP0C7Q3 252 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 ZCCHC18P0CG32 403 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 DRD1P21728 446 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 CTSSP25774 331 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 TIA1P31483 386 aaKnown RBP eCLIP6.86□□□□□ -1.31
BRCA1-230ENST00000634433 CCT8P50990 548 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 RPS13P62277 151 aaKnown RBP6.86□□□□□ -1.31
BRCA1-230ENST00000634433 YBX1P67809 324 aaKnown RBP6.86□□□□□ -1.31
BRCA1-230ENST00000634433 PHC1P78364 1004 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 OR4F3Q6IEY1 312 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 UGT2A3Q6UWM9 527 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms