RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 BORAQ6PGQ7 559 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 GOLGA7Q7Z5G4 137 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 VN1R4Q7Z5H5 301 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 CROCCP2Q86T23 111 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 TDRPQ86YL5 185 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 SLC22A9Q8IVM8 553 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 KLHDC8AQ8IYD2 350 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 C4orf33Q8N1A6 199 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 CCNYL1Q8N7R7 359 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 KCT2Q8NC54 265 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 OR4K1Q8NGD4 311 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 OR9A4Q8NGU2 314 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 SREK1Q8WXA9 508 aaKnown RBP6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 MIEF2Q96C03 454 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 REPS1Q96D71 796 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 CCDC126Q96EE4 140 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 ZNF285Q96NJ3 590 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 SMC6Q96SB8 1091 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 CRB3Q9BUF7 120 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 ROPN1BQ9BZX4 212 aaPredicted RBP6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 PITHD1Q9GZP4 211 aaPredicted RBP6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 SPNS1Q9H2V7 528 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 EHD1Q9H4M9 534 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 PRORYQ9H606 182 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 SOX17Q9H6I2 414 aaPredicted RBP6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 IPPKQ9H8X2 491 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 AKIRIN1Q9H9L7 192 aaPredicted RBP6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 ROPN1Q9HAT0 212 aaPredicted RBP6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 SEMA4BQ9NPR2 832 aaPredicted RBP6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 GEMIN8Q9NWZ8 242 aaKnown RBP6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 TMEM216Q9P0N5 145 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 HCN3Q9P1Z3 774 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 CTSFQ9UBX1 484 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 RAB21Q9UL25 225 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 GRID1Q9ULK0 1009 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 PCDHGA6Q9Y5G7 932 aa6.86□□□□□ -1.31
NPLOC4-221ENST00000625705 A0A0G2JN53 185 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 LRRC14BA6NHZ5 514 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 ARGFXA6NJG6 315 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 A8MT66 165 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 FOXO6A8MYZ6 492 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 H0YIG0 161 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 H3BMH7 237 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 SGK494L7N484 410 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 ERI3O43414 337 aaKnown RBP6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 RDH16O75452 317 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 CLDN9O95484 217 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 OTCP00480 354 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 HEXBP07686 556 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 SERPINA6P08185 405 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 ALOX12P18054 663 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 ATP5F1P24539 256 aaPredicted RBP6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 SERPINB1P30740 379 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 IDH3AP50213 366 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 CSRP3P50461 194 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 RRADP55042 308 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 RAB8AP61006 207 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 HERVK_113P63132 956 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 MAT1AQ00266 395 aaKnown RBP6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 ASPHQ12797 758 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 IFT88Q13099 833 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 IL10RAQ13651 578 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 FAM53BQ14153 422 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 RASA2Q15283 850 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 PCBP2Q15366 365 aaKnown RBP eCLIP6.85□□□□□ -1.315e-7■■■■■ 29.1
NPLOC4-221ENST00000625705 CPSF6Q16630 551 aaKnown RBP eCLIP6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 UGT8Q16880 541 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 CCDC153Q494R4 210 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 FAM69BQ5VUD6 431 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 FAAH2Q6GMR7 532 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 GRHL2Q6ISB3 625 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 METTL2BQ6P1Q9 378 aaKnown RBP6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 OVCH1Q7RTY7 1134 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 MREGQ8N565 214 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 DTWD1Q8N5C7 304 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 OR2Y1Q8NGV0 311 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 NT5CQ8TCD5 201 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 STT3BQ8TCJ2 826 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 APOBEC4Q8WW27 367 aaKnown RBP6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 METTL21AQ8WXB1 218 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 THAP4Q8WY91 577 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 EXTL1Q92935 676 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 ZBTB9Q96C00 473 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 MOCOSQ96EN8 888 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 APOPT1Q96IL0 206 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 MAGEB10Q96LZ2 347 aaPredicted RBP6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 GPR78Q96P69 363 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 IP6K3Q96PC2 410 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 UBL7Q96S82 380 aaPredicted RBP6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 ERVK-6Q9BXR3 956 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 RBCK1Q9BYM8 510 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 STMN4Q9H169 189 aaPredicted RBP6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 RHBGQ9H310 441 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 NOL11Q9H8H0 719 aaKnown RBP6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 WDR54Q9H977 334 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 MKKSQ9NPJ1 570 aaPredicted RBP6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 ACSS2Q9NR19 701 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 C14orf105Q9NVL8 296 aa6.85□□□□□ -1.31
NPLOC4-221ENST00000625705 ARGLU1Q9NWB6 273 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms