RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 CD163Q86VB7 1156 aa10.32□□□□□ -0.76
DDX41-218ENST00000625286 CYP4X1Q8N118 509 aa10.32□□□□□ -0.76
DDX41-218ENST00000625286 HORMAD2Q8N7B1 307 aa10.32□□□□□ -0.76
DDX41-218ENST00000625286 ANKRD53Q8N9V6 530 aa10.32□□□□□ -0.76
DDX41-218ENST00000625286 MCUQ8NE86 351 aa10.32□□□□□ -0.76
DDX41-218ENST00000625286 OR56A3Q8NH54 315 aa10.32□□□□□ -0.76
DDX41-218ENST00000625286 C16orf52Q8NHV5 167 aa10.32□□□□□ -0.76
DDX41-218ENST00000625286 UTP15Q8TED0 518 aaKnown RBP10.32□□□□□ -0.76
DDX41-218ENST00000625286 CA5BP1Q8WTZ4 195 aa10.32□□□□□ -0.76
DDX41-218ENST00000625286 SNF8Q96H20 258 aa10.32□□□□□ -0.76
DDX41-218ENST00000625286 PCBD2Q9H0N5 130 aa10.32□□□□□ -0.76
DDX41-218ENST00000625286 PLSCR2Q9NRY7 297 aa10.32□□□□□ -0.76
DDX41-218ENST00000625286 IARS2Q9NSE4 1012 aaKnown RBP10.32□□□□□ -0.76
DDX41-218ENST00000625286 ZFATQ9P243 1243 aa10.32□□□□□ -0.76
DDX41-218ENST00000625286 SLC17A6Q9P2U8 582 aa10.32□□□□□ -0.76
DDX41-218ENST00000625286 TNFRSF10DQ9UBN6 386 aa10.32□□□□□ -0.76
DDX41-218ENST00000625286 RNF6Q9Y252 685 aa10.32□□□□□ -0.76
DDX41-218ENST00000625286 ANKHD1Q8IWZ3 2542 aaKnown RBP10.31□□□□□ -0.76
DDX41-218ENST00000625286 TRBC2A0A5B9 178 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 SAGE2PA6NJ88 616 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 EIF3FO00303 357 aaPredicted RBP10.31□□□□□ -0.76
DDX41-218ENST00000625286 PEX1O43933 1283 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 CEP104O60308 925 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 PRMT3O60678 531 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 DIAPH2O60879 1101 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 MLYCDO95822 493 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 AHSGP02765 367 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 C8GP07360 202 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 SLC35G6P0C7Q6 338 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 TFEBP19484 476 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 PPP2R1BP30154 601 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 PTGS2P35354 604 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 HNF4AP41235 474 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 SCTRP47872 440 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 CCR8P51685 355 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 TAS2R50P59544 299 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 GPR85P60893 370 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 RAB8AP61006 207 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 PWP1Q13610 501 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 XKR6Q5GH73 641 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 QSOX2Q6ZRP7 698 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 CCDC71Q8IV32 467 aaPredicted RBP10.31□□□□□ -0.76
DDX41-218ENST00000625286 IGDCC3Q8IVU1 814 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 TXLNBQ8N3L3 684 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 NAT8LQ8N9F0 302 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 ZFP62Q8NB50 900 aaPredicted RBP10.31□□□□□ -0.76
DDX41-218ENST00000625286 C2CD4AQ8NCU7 369 aaPredicted RBP10.31□□□□□ -0.76
DDX41-218ENST00000625286 TMEM52Q8NDY8 209 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 LILRB4Q8NHJ6 448 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 NT5CQ8TCD5 201 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 CREB3L4Q8TEY5 395 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 CHTF18Q8WVB6 975 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 NEIL2Q969S2 332 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 POM121Q96HA1 1249 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 FAM129AQ9BZQ8 928 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 CCDC68Q9H2F9 335 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 LIN28AQ9H9Z2 209 aaKnown RBP10.31□□□□□ -0.76
DDX41-218ENST00000625286 SAMD15Q9P1V8 674 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 ABCA4P78363 2273 aa10.31□□□□□ -0.76
DDX41-218ENST00000625286 A0A0G2JMM0 328 aa10.3□□□□□ -0.76
DDX41-218ENST00000625286 A0A1W2PPB8 328 aa10.3□□□□□ -0.76
DDX41-218ENST00000625286 A0A1W2PRS3 328 aa10.3□□□□□ -0.76
DDX41-218ENST00000625286 KIR3DP1A8MWS1 328 aa10.3□□□□□ -0.76
DDX41-218ENST00000625286 SLC16A5O15375 505 aa10.3□□□□□ -0.76
DDX41-218ENST00000625286 BANF1O75531 89 aa10.3□□□□□ -0.76
DDX41-218ENST00000625286 SERPIND1P05546 499 aa10.3□□□□□ -0.76
DDX41-218ENST00000625286 TPOP07202 933 aa10.3□□□□□ -0.76
DDX41-218ENST00000625286 HNRNPFP52597 415 aaKnown RBP10.3□□□□□ -0.76
DDX41-218ENST00000625286 SARNPP82979 210 aaKnown RBP10.3□□□□□ -0.76
DDX41-218ENST00000625286 RUNX2Q13950 521 aa10.3□□□□□ -0.76
DDX41-218ENST00000625286 STRA8Q7Z7C7 330 aa10.3□□□□□ -0.76
DDX41-218ENST00000625286 DMRTC2Q8IXT2 367 aaPredicted RBP10.3□□□□□ -0.76
DDX41-218ENST00000625286 CA13Q8N1Q1 262 aa10.3□□□□□ -0.76
DDX41-218ENST00000625286 FAM98AQ8NCA5 519 aaKnown RBP10.3□□□□□ -0.76
DDX41-218ENST00000625286 LINGO1Q96FE5 620 aa10.3□□□□□ -0.76
DDX41-218ENST00000625286 MS4A14Q96JA4 679 aa10.3□□□□□ -0.76
DDX41-218ENST00000625286 SLC6A16Q9GZN6 736 aa10.3□□□□□ -0.76
DDX41-218ENST00000625286 DEFB127Q9H1M4 99 aa10.3□□□□□ -0.76
DDX41-218ENST00000625286 RHBGQ9H310 441 aa10.3□□□□□ -0.76
DDX41-218ENST00000625286 LZTFL1Q9NQ48 299 aa10.3□□□□□ -0.76
DDX41-218ENST00000625286 TRMT6Q9UJA5 497 aaKnown RBP10.3□□□□□ -0.76
DDX41-218ENST00000625286 ZFP69BQ9UJL9 534 aa10.3□□□□□ -0.76
DDX41-218ENST00000625286 MAD1L1Q9Y6D9 718 aa10.3□□□□□ -0.76
DDX41-218ENST00000625286 COMMD10Q9Y6G5 202 aa10.3□□□□□ -0.76
DDX41-218ENST00000625286 TRBV11-1A0A0K0K1C0 115 aa10.29□□□□□ -0.76
DDX41-218ENST00000625286 FAM90A27PA6NNH2 459 aa10.29□□□□□ -0.76
DDX41-218ENST00000625286 CDK2AP1O14519 115 aa10.29□□□□□ -0.76
DDX41-218ENST00000625286 TFECO14948 347 aaPredicted RBP10.29□□□□□ -0.76
DDX41-218ENST00000625286 NRDCO43847 1150 aa10.29□□□□□ -0.76
DDX41-218ENST00000625286 CDC40O60508 579 aaKnown RBP eCLIP10.29□□□□□ -0.76
DDX41-218ENST00000625286 ZNF354AO60765 605 aaPredicted RBP10.29□□□□□ -0.76
DDX41-218ENST00000625286 ITGA10O75578 1167 aa10.29□□□□□ -0.76
DDX41-218ENST00000625286 TBX6O95947 436 aaPredicted RBP10.29□□□□□ -0.76
DDX41-218ENST00000625286 CCND1P24385 295 aa10.29□□□□□ -0.76
DDX41-218ENST00000625286 MSX1P28360 303 aa10.29□□□□□ -0.76
DDX41-218ENST00000625286 GRK3P35626 688 aa10.29□□□□□ -0.76
DDX41-218ENST00000625286 NUP107P57740 925 aa10.29□□□□□ -0.76
DDX41-218ENST00000625286 PMPCAQ10713 525 aa10.29□□□□□ -0.76
DDX41-218ENST00000625286 SP140Q13342 867 aa10.29□□□□□ -0.76
DDX41-218ENST00000625286 KRTAP21-3Q3LHN1 58 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms