RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 PGRP06401 933 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 ZNF806P0C7X5 589 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 CKMT1AP12532 417 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 GFERP55789 205 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 ARF3P61204 181 aaPredicted RBP13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 SRSF11Q05519 484 aaKnown RBP13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 CCDC6Q16204 474 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 PROX2Q3B8N5 592 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 FAM174BQ3ZCQ3 159 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 TOR1AIP1Q5JTV8 583 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 FRMPD2BQ6IN97 320 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 UBE3DQ7Z6J8 389 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 ARHGAP24Q8N264 748 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 TMEM132CQ8N3T6 1108 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 KRTCAP2Q8N6L1 136 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 Q8N9G6 341 aaPredicted RBP13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 CLHC1Q8NHS4 586 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 FBXO27Q8NI29 283 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 WDR48Q8TAF3 677 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 MIEF2Q96C03 454 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 RAB3IPQ96QF0 476 aaPredicted RBP13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 NPAS2Q99743 824 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 DPYSL5Q9BPU6 564 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 NLNQ9BYT8 704 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 ROGDIQ9GZN7 287 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 AICDAQ9GZX7 198 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 SMOC1Q9H4F8 434 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 SYNPO2LQ9H987 977 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 PDE7BQ9NP56 450 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 LHX9Q9NQ69 397 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 SEMA5BQ9P283 1151 aa13.55□□□□□ -0.24
CLTCL1-212ENST00000622493 LNP1A1A4G5 178 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 CPED1A4D0V7 1026 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 ERI3O43414 337 aaKnown RBP13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 MYF5P13349 255 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 HPCAL1P37235 193 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 SSR2P43308 183 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 MAPK12P53778 367 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 PLA2G16P53816 162 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 ELF3P78545 371 aaPredicted RBP13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 SLC25A3Q00325 362 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 SLC14A1Q13336 389 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 TLR1Q15399 786 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 CLPPQ16740 277 aaPredicted RBP13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 AMZ1Q400G9 498 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 TCEAL6Q6IPX3 200 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 GUSBP11Q6P575 273 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 MSANTD1Q6ZTZ1 278 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 R3HCC1LQ7Z5L2 792 aaKnown RBP13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 CAMKMTQ7Z624 323 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 KMT5CQ86Y97 462 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 DSELQ8IZU8 1212 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 PGAM4Q8N0Y7 254 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 ZCCHC7Q8N3Z6 543 aaKnown RBP13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 DNAJC22Q8N4W6 341 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 SUMF1Q8NBK3 374 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 OR8J2Q8NGG1 315 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 C16orf78Q8WTQ4 265 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 TCEAL3Q969E4 200 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 MCUR1Q96AQ8 359 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 VPS33AQ96AX1 596 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 MTERF3Q96E29 417 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 C17orf62Q9BQA9 187 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 CCDC3Q9BQI4 270 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 KLHL31Q9H511 634 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 FAM60AQ9NP50 221 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 PRDM7Q9NQW5 492 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 GID8Q9NWU2 228 aa13.54□□□□□ -0.24
CLTCL1-212ENST00000622493 A0A088AWK7 358 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 LOC105369274A0A096LPK9 316 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 A0A0A6YYD5 115 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 IGHV5-51A0A0C4DH38 117 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 LOC102723532A0A0G2JNH3 316 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 C9JVG2 144 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 RTCAO00442 366 aaKnown RBP13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 SCAMP2O15127 329 aaKnown RBP13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 FLRT2O43155 660 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 PRAMEF10O60809 474 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 GUCY1B2O75343 617 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 SCELO95171 688 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 ATP6V1G2O95670 118 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 GBAP04062 536 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 ITGAXP20702 1163 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 ZNF10P21506 573 aaPredicted RBP13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 HIST1H1TP22492 207 aaPredicted RBP13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 S100A3P33764 101 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 GRK6P43250 576 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 TAS2R50P59544 299 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 SLC9A5Q14940 896 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 HEPACAMQ14CZ8 416 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 MAPKAPK3Q16644 382 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 HKDC1Q2TB90 917 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 TIGD2Q4W5G0 525 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 SPANXN4Q5MJ08 99 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 TMEM71Q6P5X7 295 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 ABHD13Q7L211 337 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 PRSS42Q7Z5A4 293 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 GPR180Q86V85 440 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 MCATQ8IVS2 390 aaKnown RBP13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 OR4N4Q8N0Y3 316 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms