RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 FOXJ1Q92949 421 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 UBE2FQ969M7 185 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 NEIL2Q969S2 332 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 TAMM41Q96BW9 452 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 OTUB2Q96DC9 234 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 CRELD1Q96HD1 420 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 DEFB118Q96PH6 123 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 KCNC2Q96PR1 638 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 FEVQ99581 238 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 MYOCQ99972 504 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 RHNO1Q9BSD3 238 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 COPS4Q9BT78 406 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 NXF2Q9GZY0 626 aaKnown RBP9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 MMP27Q9H306 513 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 RUBCNLQ9H714 662 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 C1GALT1Q9NS00 363 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 RASSF1Q9NS23 344 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 ZNF226Q9NYT6 803 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 SELENONQ9NZV5 590 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 SH3BP4Q9P0V3 963 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 KIF26AQ9ULI4 1882 aaPredicted RBP9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 NUP214P35658 2090 aaPredicted RBP9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 GNG14A0A1W2PPG7 69 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 KRBA1A5PL33 1030 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 PRAMEF25A6NGN4 478 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 METTL15A6NJ78 407 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 CLCA1A8K7I4 914 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 EFCAB9A8MZ26 197 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 H3BM21 787 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 TAF4O00268 1085 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 TOR1BO14657 336 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 CCL16O15467 120 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 KRT75O95678 551 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 C6orf47O95873 294 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 VIPP01282 170 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 HLA-EP13747 358 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 ETFAP13804 333 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 PTPN2P17706 415 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 PDHA2P29803 388 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 CD40LGP29965 261 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 NNMTP40261 264 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 CTSKP43235 329 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 XCR1P46094 333 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 MNX1P50219 401 aaPredicted RBP9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 PPP5CP53041 499 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 LIMK1P53667 647 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 PCBP3P57721 371 aaKnown RBP9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 WDR5P61964 334 aaKnown RBP9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 NCS1P62166 190 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 TBPL1P62380 186 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 HBA1P69905 142 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 IFITM3Q01628 133 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 C2orf80Q0P641 193 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 CBX3Q13185 183 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 EIF4HQ15056 248 aaKnown RBP9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 TEAD2Q15562 447 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 CYP2A13Q16696 494 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 MPEG1Q2M385 716 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 FBXO43Q4G163 708 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 LY6G5CQ5SRR4 150 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 AGAP7PQ5VUJ5 663 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 TMEM236Q5W0B7 351 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 ERAP2Q6P179 960 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 TRIM40Q6P9F5 258 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 NXPE4Q6UWF7 544 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 ZNF852Q6ZMS4 543 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 IKBIPQ70UQ0 350 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 ARMCX6Q7L4S7 300 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 OTOP2Q7RTS6 562 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 COMMD6Q7Z4G1 85 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 BTLAQ7Z6A9 289 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 TMCO2Q7Z6W1 182 aaPredicted RBP9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 TMPRSS11BQ86T26 416 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 ZNF605Q86T29 641 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 ARMC8Q8IUR7 673 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 PLD3Q8IV08 490 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 P3H2Q8IVL5 708 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 GPR156Q8NFN8 814 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 OR9A1PQ8NGU1 263 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 WDR48Q8TAF3 677 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 C9orf43Q8TAL5 461 aaPredicted RBP9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 SPPL2AQ8TCT8 520 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 WFIKKN2Q8TEU8 576 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 GEMIN6Q8WXD5 167 aaKnown RBP9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 RPL3LQ92901 407 aaKnown RBP9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 MAL2Q969L2 176 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 UBE2E3Q969T4 207 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 PPCDCQ96CD2 204 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 AP2M1Q96CW1 435 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 ZHX1-C8orf76Q96EF9 292 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 TCEAL4Q96EI5 215 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 DTD2Q96FN9 168 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 PPP1R16AQ96I34 528 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 LINC00615Q96LM1 132 aaPredicted RBP9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 SAMD11Q96NU1 681 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 COL21A1Q96P44 957 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 MAPKAP1Q9BPZ7 522 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 SLC35A5Q9BS91 424 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 LINC00597Q9H2U6 94 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 GPBP1L1Q9HC44 474 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms