RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 BARD1Q99728 777 aaKnown RBP16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 TMEM79Q9BSE2 394 aa16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 TUBB6Q9BUF5 446 aa16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 SLC6A16Q9GZN6 736 aa16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 AICDAQ9GZX7 198 aa16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 KLHL31Q9H511 634 aa16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 UQCRHLA0A096LP55 91 aa16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 IQANK1A0A1B0GTG1 560 aa16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 CHST10O43529 356 aa16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 WFS1O76024 890 aa16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 SEC24DO94855 1032 aaPredicted RBP16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 UQCRHP07919 91 aa16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 CYC1P08574 325 aa16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 SMIM10L1P0DMW3 83 aa16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 ICAM2P13598 275 aa16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 GNAZP19086 355 aa16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 IL10P22301 178 aa16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 GGT5P36269 586 aa16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 KCNC1P48547 511 aa16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 RAB8AP61006 207 aa16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 ZNF169Q14929 603 aaPredicted RBP16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 TLR1Q15399 786 aa16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 EIF2S3LQ2VIR3 472 aaKnown RBP16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 RAPH1Q70E73 1250 aa16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 CMC1Q7Z7K0 106 aa16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 PLPP5Q8NEB5 264 aa16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 KIAA1191Q96A73 305 aa16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 ESAMQ96AP7 390 aa16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 SMIM10Q96HG1 83 aa16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 PAFAH2Q99487 392 aa16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 SLC29A3Q9BZD2 475 aa16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 PLA2G3Q9NZ20 509 aa16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 FETUBQ9UGM5 382 aa16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 SPTAN1Q13813 2472 aaKnown RBP16.92■□□□□ 0.3
SCAMP4-213ENST00000621748 ZGRF1Q86YA3 2104 aa16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 SPTBN1Q01082 2364 aaKnown RBP16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 CYSRT1A8MQ03 144 aa16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 C4orf51C9J302 202 aa16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 PRAMEF4O60810 478 aa16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 CBX6O95503 412 aa16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 SLC35E2BP0CK96 405 aa16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 TSFMP43897 325 aaKnown RBP16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 HSPA7P48741 367 aa16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 DLG1Q12959 904 aa16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 CDC16Q13042 620 aa16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 NR6A1Q15406 480 aa16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 CDKL4Q5MAI5 379 aa16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 PRAMEF9Q5VWM5 478 aa16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 SULT1C3Q6IMI6 304 aa16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 ABHD13Q7L211 337 aa16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 TCAIMQ8N3R3 496 aa16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 SLC44A1Q8WWI5 657 aa16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 TSLPQ969D9 159 aa16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 TBC1D20Q96BZ9 403 aa16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 OR1F2PQ96R84 312 aa16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 WWOXQ9NZC7 414 aa16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 PSMC3IPQ9P2W1 217 aaPredicted RBP16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 C19orf25Q9UFG5 118 aaPredicted RBP16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 PTBP2Q9UKA9 531 aaKnown RBP16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 POLEQ07864 2286 aa16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 ICE1Q9Y2F5 2266 aa16.91■□□□□ 0.3
SCAMP4-213ENST00000621748 TLDC2A0PJX2 215 aa16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 GOLGA6L10A6NI86 522 aa16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 SMIM23A6NLE4 172 aa16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 SEMA7AO75326 666 aa16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 H2AFYO75367 372 aaKnown RBP16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 F10P00742 488 aa16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 FHP07954 510 aa16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 SERPINA6P08185 405 aa16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 AGTR2P50052 363 aa16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 ARG2P78540 354 aa16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 SLBPQ14493 270 aaKnown RBP eCLIP16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 ABRAXAS2Q15018 415 aa16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 NSDHLQ15738 373 aa16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 TOR1AIP1Q5JTV8 583 aa16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 UBAP2Q5T6F2 1119 aaKnown RBP16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 FHL5Q5TD97 284 aa16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 PLAG1Q6DJT9 500 aa16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 TMIGD1Q6UXZ0 262 aa16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 ISCA2Q86U28 154 aa16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 PDPRQ8NCN5 879 aa16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 OR1N1Q8NGS0 311 aa16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 HAS2Q92819 552 aa16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 MTBPQ96DY7 904 aa16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 ROPN1BQ9BZX4 212 aaPredicted RBP16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 ALG9Q9H6U8 611 aa16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 CNOT10Q9H9A5 744 aaKnown RBP16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 ROPN1Q9HAT0 212 aaPredicted RBP16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 DNAJC11Q9NVH1 559 aa16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 GPRC5BQ9NZH0 403 aa16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 CD274Q9NZQ7 290 aa16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 ZNF180Q9UJW8 692 aa16.9■□□□□ 0.3
SCAMP4-213ENST00000621748 UTP20O75691 2785 aaKnown RBP16.89■□□□□ 0.3
SCAMP4-213ENST00000621748 DYTNA2CJ06 578 aa16.89■□□□□ 0.29
SCAMP4-213ENST00000621748 URADA6NGE7 173 aa16.89■□□□□ 0.29
SCAMP4-213ENST00000621748 MAGEB17A8MXT2 336 aa16.89■□□□□ 0.29
SCAMP4-213ENST00000621748 B4GALT2O60909 372 aa16.89■□□□□ 0.29
SCAMP4-213ENST00000621748 STK16O75716 305 aa16.89■□□□□ 0.29
SCAMP4-213ENST00000621748 WDPCPO95876 746 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms