RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 ZNF891A8MT65 544 aaPredicted RBP17.61■□□□□ 0.41
CIRBP-245ENST00000621399 ERI3O43414 337 aaKnown RBP17.61■□□□□ 0.41
CIRBP-245ENST00000621399 GALR3O60755 368 aaPredicted RBP17.61■□□□□ 0.41
CIRBP-245ENST00000621399 SH3BGRLO75368 114 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 RDH16O75452 317 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 CREG1O75629 220 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 TBX6O95947 436 aaPredicted RBP17.61■□□□□ 0.41
CIRBP-245ENST00000621399 B3GALT4O96024 378 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 BPGMP07738 259 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 SMIM10L1P0DMW3 83 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 PLA2G16P53816 162 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 CXADRP78310 365 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 BTN3A2P78410 334 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 MAT1AQ00266 395 aaKnown RBP17.61■□□□□ 0.41
CIRBP-245ENST00000621399 MC1RQ01726 317 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 OCA2Q04671 838 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 TGM3Q08188 693 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 MPP2Q14168 576 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 NKG7Q16617 165 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 SYT16Q17RD7 645 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 ADPRMQ3LIE5 342 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 TMEM35AQ53FP2 167 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 SGO1Q5FBB7 561 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 AGBL2Q5U5Z8 902 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 FAM69BQ5VUD6 431 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 FRG2Q64ET8 278 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 RNF175Q8N4F7 328 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 CDYL2Q8N8U2 506 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 AMER3Q8N944 861 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 OR2L5Q8NG80 312 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 ARL8AQ96BM9 186 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 SMIM10Q96HG1 83 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 FRG2BQ96QU4 278 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 GATA5Q9BWX5 397 aaPredicted RBP17.61■□□□□ 0.41
CIRBP-245ENST00000621399 MS4A8Q9BY19 250 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 SLC26A1Q9H2B4 701 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 ELOVL6Q9H5J4 265 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 DMRT3Q9NQL9 472 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 HCN3Q9P1Z3 774 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 ZNF225Q9UK10 706 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 SNX6Q9UNH7 406 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 PTRH2Q9Y3E5 179 aaKnown RBP17.61■□□□□ 0.41
CIRBP-245ENST00000621399 MAP4K5Q9Y4K4 846 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 LAMA5O15230 3695 aa17.61■□□□□ 0.41
CIRBP-245ENST00000621399 ZNF860A6NHJ4 632 aa17.6■□□□□ 0.41
CIRBP-245ENST00000621399 MAGEB17A8MXT2 336 aa17.6■□□□□ 0.41
CIRBP-245ENST00000621399 K7ENP7 123 aa17.6■□□□□ 0.41
CIRBP-245ENST00000621399 UBFD1O14562 309 aaKnown RBP17.6■□□□□ 0.41
CIRBP-245ENST00000621399 NKX2-8O15522 239 aa17.6■□□□□ 0.41
CIRBP-245ENST00000621399 CNOT3O75175 753 aaKnown RBP17.6■□□□□ 0.41
CIRBP-245ENST00000621399 KLF7O75840 302 aaPredicted RBP17.6■□□□□ 0.41
CIRBP-245ENST00000621399 ESRRBO95718 433 aa17.6■□□□□ 0.41
CIRBP-245ENST00000621399 PTX3P26022 381 aaPredicted RBP17.6■□□□□ 0.41
CIRBP-245ENST00000621399 FOLR3P41439 243 aa17.6■□□□□ 0.41
CIRBP-245ENST00000621399 CCR10P46092 362 aa17.6■□□□□ 0.41
CIRBP-245ENST00000621399 SERPINB4P48594 390 aa17.6■□□□□ 0.41
CIRBP-245ENST00000621399 RPS13P62277 151 aaKnown RBP17.6■□□□□ 0.41
CIRBP-245ENST00000621399 ERV3-1Q14264 604 aa17.6■□□□□ 0.41
CIRBP-245ENST00000621399 C10orf62Q5T681 223 aaPredicted RBP17.6■□□□□ 0.41
CIRBP-245ENST00000621399 KHDRBS2Q5VWX1 349 aaKnown RBP17.6■□□□□ 0.41
CIRBP-245ENST00000621399 TRIM40Q6P9F5 258 aa17.6■□□□□ 0.41
CIRBP-245ENST00000621399 INO80CQ6PI98 192 aaPredicted RBP17.6■□□□□ 0.41
CIRBP-245ENST00000621399 NUDCD3Q8IVD9 361 aa17.6■□□□□ 0.41
CIRBP-245ENST00000621399 ANKRD42Q8N9B4 389 aa17.6■□□□□ 0.41
CIRBP-245ENST00000621399 METTL6Q8TCB7 284 aa17.6■□□□□ 0.41
CIRBP-245ENST00000621399 AGAP11Q8TF27 550 aa17.6■□□□□ 0.41
CIRBP-245ENST00000621399 MIEF2Q96C03 454 aa17.6■□□□□ 0.41
CIRBP-245ENST00000621399 CNDP1Q96KN2 507 aa17.6■□□□□ 0.41
CIRBP-245ENST00000621399 OR51B5Q9H339 312 aa17.6■□□□□ 0.41
CIRBP-245ENST00000621399 WDR54Q9H977 334 aa17.6■□□□□ 0.41
CIRBP-245ENST00000621399 MKKSQ9NPJ1 570 aaPredicted RBP17.6■□□□□ 0.41
CIRBP-245ENST00000621399 NXT1Q9UKK6 140 aaKnown RBP17.6■□□□□ 0.41
CIRBP-245ENST00000621399 DSPP15924 2871 aaKnown RBP17.6■□□□□ 0.41
CIRBP-245ENST00000621399 FAM208BQ5VWN6 2430 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 A0A088AWK7 358 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 A0A0G2JN53 185 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 TMEM120BA0PK00 339 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 WDR91A4D1P6 747 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 C4orf51C9J302 202 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 FOXE1O00358 373 aaPredicted RBP17.59■□□□□ 0.41
CIRBP-245ENST00000621399 SAP18O00422 153 aaKnown RBP17.59■□□□□ 0.41
CIRBP-245ENST00000621399 ENO1P06733 434 aaKnown RBP17.59■□□□□ 0.41
CIRBP-245ENST00000621399 PRKAR1AP10644 381 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 ZNF10P21506 573 aaPredicted RBP17.59■□□□□ 0.41
CIRBP-245ENST00000621399 HMOX2P30519 316 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 FOXL2P58012 376 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 VWA2Q5GFL6 755 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 DEPDC1Q5TB30 811 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 ABHD17CQ6PCB6 329 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 SHISA6Q6ZSJ9 500 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 PRSS58Q8IYP2 241 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 SRFBP1Q8NEF9 429 aaKnown RBP17.59■□□□□ 0.41
CIRBP-245ENST00000621399 OR5T3Q8NGG3 340 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 OR2Y1Q8NGV0 311 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 OR51Q1Q8NH59 317 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 PPP1R14CQ8TAE6 165 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 STT3BQ8TCJ2 826 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 PKNOX2Q96KN3 472 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 ATP6V1G3Q96LB4 118 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 KCNC2Q96PR1 638 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms