RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 ADAMTS6Q9UKP5 1117 aa15.33■□□□□ 0.04
CD40-207ENST00000620709 USP9XQ93008 2570 aaPredicted RBP15.32■□□□□ 0.04
CD40-207ENST00000620709 ANKRD12Q6UB98 2062 aa15.32■□□□□ 0.04
CD40-207ENST00000620709 SLCO1B7G3V0H7 640 aa15.32■□□□□ 0.04
CD40-207ENST00000620709 PRICKLE3O43900 615 aaPredicted RBP15.32■□□□□ 0.04
CD40-207ENST00000620709 SIX3O95343 332 aaPredicted RBP15.32■□□□□ 0.04
CD40-207ENST00000620709 RPS17P08708 135 aaKnown RBP15.32■□□□□ 0.04
CD40-207ENST00000620709 CMPK1P30085 196 aa15.32■□□□□ 0.04
CD40-207ENST00000620709 RPL14P50914 215 aaKnown RBP15.32■□□□□ 0.04
CD40-207ENST00000620709 YBX1P67809 324 aaKnown RBP15.32■□□□□ 0.04
CD40-207ENST00000620709 CDKL1Q00532 357 aa15.32■□□□□ 0.04
CD40-207ENST00000620709 MRPL49Q13405 166 aaKnown RBP15.32■□□□□ 0.04
CD40-207ENST00000620709 NKG7Q16617 165 aa15.32■□□□□ 0.04
CD40-207ENST00000620709 PHKG1Q16816 387 aa15.32■□□□□ 0.04
CD40-207ENST00000620709 FAM214AQ32MH5 1076 aa15.32■□□□□ 0.04
CD40-207ENST00000620709 PLEKHN1Q494U1 663 aaPredicted RBP15.32■□□□□ 0.04
CD40-207ENST00000620709 SUSD1Q6UWL2 747 aa15.32■□□□□ 0.04
CD40-207ENST00000620709 UBE2R2Q712K3 238 aaPredicted RBP15.32■□□□□ 0.04
CD40-207ENST00000620709 CISD2Q8N5K1 135 aaKnown RBP15.32■□□□□ 0.04
CD40-207ENST00000620709 OR9A1PQ8NGU1 263 aa15.32■□□□□ 0.04
CD40-207ENST00000620709 FKBP10Q96AY3 582 aa15.32■□□□□ 0.04
CD40-207ENST00000620709 C19orf60Q96EN9 201 aa15.32■□□□□ 0.04
CD40-207ENST00000620709 EGFL8Q99944 293 aa15.32■□□□□ 0.04
CD40-207ENST00000620709 YIPF2Q9BWQ6 316 aa15.32■□□□□ 0.04
CD40-207ENST00000620709 TRIM54Q9BYV2 358 aa15.32■□□□□ 0.04
CD40-207ENST00000620709 SLC29A3Q9BZD2 475 aa15.32■□□□□ 0.04
CD40-207ENST00000620709 KCNK13Q9HB14 408 aa15.32■□□□□ 0.04
CD40-207ENST00000620709 SPATA7Q9P0W8 599 aa15.32■□□□□ 0.04
CD40-207ENST00000620709 CTSFQ9UBX1 484 aa15.32■□□□□ 0.04
CD40-207ENST00000620709 TNPO3Q9Y5L0 923 aaKnown RBP15.32■□□□□ 0.04
CD40-207ENST00000620709 LOC105369274A0A096LPK9 316 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 LOC102723532A0A0G2JNH3 316 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 HYKKA2RU49 373 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 KLHL41O60662 606 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 FKBP9O95302 570 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 GP1BBP13224 206 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 ALOX15P16050 662 aaPredicted RBP15.31■□□□□ 0.04
CD40-207ENST00000620709 GCGRP47871 477 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 AQP5P55064 265 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 RBBP7Q16576 425 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 EIF2S3LQ2VIR3 472 aaKnown RBP15.31■□□□□ 0.04
CD40-207ENST00000620709 CDKL4Q5MAI5 379 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 IRAK1BP1Q5VVH5 260 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 YOD1Q5VVQ6 348 aaPredicted RBP15.31■□□□□ 0.04
CD40-207ENST00000620709 SULT1C3Q6IMI6 304 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 C6orf89Q6UWU4 347 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 COX15Q7KZN9 410 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 CUZD1Q86UP6 607 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 PARP9Q8IXQ6 854 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 OR4N4Q8N0Y3 316 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 ZADH2Q8N4Q0 377 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 AFAP1L2Q8N4X5 818 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 OR2A1Q8NGT9 310 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 PRR7Q8TB68 274 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 ASB11Q8WXH4 323 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 DPH7Q9BTV6 452 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 ZNF552Q9H707 407 aaPredicted RBP15.31■□□□□ 0.04
CD40-207ENST00000620709 PARVBQ9HBI1 364 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 SLC6A20Q9NP91 592 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 B3GNT3Q9Y2A9 372 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 SHANK1Q9Y566 2161 aa15.31■□□□□ 0.04
CD40-207ENST00000620709 USP9YO00507 2555 aaPredicted RBP15.3■□□□□ 0.04
CD40-207ENST00000620709 A0A1W2PPV9 198 aa15.3■□□□□ 0.04
CD40-207ENST00000620709 ARHGEF33A8MVX0 844 aa15.3■□□□□ 0.04
CD40-207ENST00000620709 GFYI3L273 518 aa15.3■□□□□ 0.04
CD40-207ENST00000620709 SRPX2O60687 465 aaPredicted RBP15.3■□□□□ 0.04
CD40-207ENST00000620709 DCTN3O75935 186 aa15.3■□□□□ 0.04
CD40-207ENST00000620709 ALBP02768 609 aa15.3■□□□□ 0.04
CD40-207ENST00000620709 ANXA5P08758 320 aa15.3■□□□□ 0.04
CD40-207ENST00000620709 HIST1H2AGP0C0S8 130 aaPredicted RBP15.3■□□□□ 0.04
CD40-207ENST00000620709 HIST1H2ADP20671 130 aa15.3■□□□□ 0.04
CD40-207ENST00000620709 MMP11P24347 488 aa15.3■□□□□ 0.04
CD40-207ENST00000620709 IFT88Q13099 833 aa15.3■□□□□ 0.04
CD40-207ENST00000620709 AIMP2Q13155 320 aaKnown RBP15.3■□□□□ 0.04
CD40-207ENST00000620709 PCBP2Q15366 365 aaKnown RBP eCLIP15.3■□□□□ 0.04
CD40-207ENST00000620709 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.3■□□□□ 0.04
CD40-207ENST00000620709 RPS27LQ71UM5 84 aaKnown RBP15.3■□□□□ 0.04
CD40-207ENST00000620709 HMGCLL1Q8TB92 370 aa15.3■□□□□ 0.04
CD40-207ENST00000620709 AGR3Q8TD06 166 aa15.3■□□□□ 0.04
CD40-207ENST00000620709 UBTD2Q8WUN7 234 aa15.3■□□□□ 0.04
CD40-207ENST00000620709 TM9SF4Q92544 642 aa15.3■□□□□ 0.04
CD40-207ENST00000620709 HIST1H2AHQ96KK5 128 aa15.3■□□□□ 0.04
CD40-207ENST00000620709 HIST1H2AJQ99878 128 aa15.3■□□□□ 0.04
CD40-207ENST00000620709 H2AFJQ9BTM1 129 aa15.3■□□□□ 0.04
CD40-207ENST00000620709 WDR54Q9H977 334 aa15.3■□□□□ 0.04
CD40-207ENST00000620709 ZBTB20Q9HC78 741 aaPredicted RBP15.3■□□□□ 0.04
CD40-207ENST00000620709 ZNF304Q9HCX3 659 aa15.3■□□□□ 0.04
CD40-207ENST00000620709 MRPS30Q9NP92 439 aaKnown RBP15.3■□□□□ 0.04
CD40-207ENST00000620709 WWOXQ9NZC7 414 aa15.3■□□□□ 0.04
CD40-207ENST00000620709 VTI1BQ9UEU0 232 aa15.3■□□□□ 0.04
CD40-207ENST00000620709 ZDHHC2Q9UIJ5 367 aa15.3■□□□□ 0.04
CD40-207ENST00000620709 PTBP2Q9UKA9 531 aaKnown RBP15.3■□□□□ 0.04
CD40-207ENST00000620709 PCTPQ9UKL6 214 aa15.3■□□□□ 0.04
CD40-207ENST00000620709 PDE10AQ9Y233 779 aa15.3■□□□□ 0.04
CD40-207ENST00000620709 LRRC14BA6NHZ5 514 aa15.29■□□□□ 0.04
CD40-207ENST00000620709 MED26O95402 600 aa15.29■□□□□ 0.04
CD40-207ENST00000620709 MATN4O95460 622 aa15.29■□□□□ 0.04
CD40-207ENST00000620709 GUCA1CO95843 209 aa15.29■□□□□ 0.04
CD40-207ENST00000620709 CATP04040 527 aaKnown RBP15.29■□□□□ 0.04
CD40-207ENST00000620709 AGTR2P50052 363 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms