RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 CASC3O15234 703 aaKnown RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 PEX1O43933 1283 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 TMPRSS11DO60235 418 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 SDC3O75056 442 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 APBB3O95704 486 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 WNT1P04628 370 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 CHRM5P08912 532 aaPredicted RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 MAGP20916 626 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 PSMA4P25789 261 aaKnown RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 KIAA1024LP59773 190 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 MTAPQ13126 283 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 FZD2Q14332 565 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 DUOXA1Q1HG43 343 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 ZNF750Q32MQ0 723 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 COX20Q5RI15 118 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 DEPDC1Q5TB30 811 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 LCN8Q6JVE9 175 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 UBE3DQ7Z6J8 389 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 LSRQ86X29 649 aaPredicted RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 TMEFF1Q8IYR6 380 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 METTL4Q8N3J2 472 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 KCT2Q8NC54 265 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 ZNF548Q8NEK5 533 aaPredicted RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 OR4A15Q8NGL6 344 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 OR2L8Q8NGY9 312 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 MAGEB10Q96LZ2 347 aaPredicted RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 NSMCE2Q96MF7 247 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 TEFMQ96QE5 360 aaKnown RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 LTB4R2Q9NPC1 389 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 CCM2LQ9NUG4 571 aaPredicted RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 DNAAF2Q9NVR5 837 aaKnown RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 C6orf203Q9P0P8 240 aaPredicted RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 TAAR2Q9P1P5 351 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 MCM8Q9UJA3 840 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 COLEC10Q9Y6Z7 277 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 A0A096LPI6 279 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 MYOCOSA0A1B0GUC4 107 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 ELOVL7A1L3X0 281 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 AGRPO00253 132 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 DNAJB6O75190 326 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 NPPAP01160 153 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 F3P13726 295 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 CTSEP14091 401 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 ACPPP15309 386 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 HTR1EP28566 365 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 BSGP35613 385 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 MAPK12P53778 367 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 RPS26P62854 115 aaKnown RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 SRSF11Q05519 484 aaKnown RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 DMWDQ09019 674 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 SFSWAPQ12872 951 aaKnown RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 BNIP2Q12982 314 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 CYP27C1Q4G0S4 372 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 LRRC23Q53EV4 343 aaPredicted RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 ABRAXAS1Q6UWZ7 409 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 ZNF793Q6ZN11 406 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 PTRH1Q86Y79 214 aaKnown RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 TRIM48Q8IWZ4 208 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 RAB42Q8N4Z0 105 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 FAM46DQ8NEK8 389 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 OR8J3Q8NGG0 315 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 OR8K5Q8NH50 307 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.44□□□□□ -1.22
NEK3-207ENST00000617054 FAM162AQ96A26 154 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 ZUFSPQ96AP4 578 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 EXOSC8Q96B26 276 aaKnown RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 CPPED1Q9BRF8 314 aaPredicted RBP7.44□□□□□ -1.22
NEK3-207ENST00000617054 CHID1Q9BWS9 393 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 MS4A8Q9BY19 250 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 MIEF1Q9NQG6 463 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 PCDHB3Q9Y5E6 796 aa7.44□□□□□ -1.22
NEK3-207ENST00000617054 NCOR1O75376 2440 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 A0A0J9YVX5 310 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 SPTY2D1-AS1A0A0U1RR47 76 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 A0A1W2PPC4 97 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 B4DGG1 531 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 CXCR6O00574 342 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 PRICKLE3O43900 615 aaPredicted RBP7.43□□□□□ -1.22
NEK3-207ENST00000617054 ERN1O75460 977 aaKnown RBP7.43□□□□□ -1.22
NEK3-207ENST00000617054 PRKD3O94806 890 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 SERPINA1P01009 418 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 EIF2S1P05198 315 aaKnown RBP7.43□□□□□ -1.22
NEK3-207ENST00000617054 FURINP09958 794 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 C8orf89P0DMQ9 161 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 HSD3B1P14060 373 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 HOXB9P17482 250 aaPredicted RBP7.43□□□□□ -1.22
NEK3-207ENST00000617054 GGT1P19440 569 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 HSD3B2P26439 372 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 PIK3CBP42338 1070 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 PPM1FP49593 454 aaPredicted RBP7.43□□□□□ -1.22
NEK3-207ENST00000617054 RPL6Q02878 288 aaKnown RBP7.43□□□□□ -1.22
NEK3-207ENST00000617054 FOLH1Q04609 750 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 PRKCQQ04759 706 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 ILF3Q12906 894 aaKnown RBP eCLIP7.43□□□□□ -1.22
NEK3-207ENST00000617054 TUSC1Q2TAM9 212 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 LRIF1Q5T3J3 769 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 ANKRD34AQ69YU3 496 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 IYDQ6PHW0 289 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 HS3ST5Q8IZT8 346 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 NAGSQ8N159 534 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms