RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 VANGL1Q8TAA9 524 aaPredicted RBP10.45□□□□□ -0.74
FAM3A-221ENST00000612856 SMPDL3BQ92485 455 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 USP7Q93009 1102 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 NT5C3BQ969T7 300 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 PPCDCQ96CD2 204 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 C19orf60Q96EN9 201 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 VPS35Q96QK1 796 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 SLX1AQ9BQ83 275 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 MKRN2Q9H000 416 aaKnown RBP10.45□□□□□ -0.74
FAM3A-221ENST00000612856 CD320Q9NPF0 282 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 VPS4AQ9UN37 437 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 PIPSLA2A3N6 862 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 A8MT66 165 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 M0QX08 132 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 BMP4P12644 408 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 PVRP15151 417 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 HMGCLP35914 325 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 GLYATQ6IB77 296 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 TNFAIP8L2Q6P589 184 aaPredicted RBP10.45□□□□□ -0.74
FAM3A-221ENST00000612856 TXNDC11Q6PKC3 985 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 CD300LGQ6UXG3 332 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 C16orf62Q7Z3J2 963 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 PGBD5Q8N414 524 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 NATD1Q8N6N6 113 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 CNIH3Q8TBE1 160 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 RDH11Q8TC12 318 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 RPL3LQ92901 407 aaKnown RBP10.45□□□□□ -0.74
FAM3A-221ENST00000612856 REPS1Q96D71 796 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 C17orf62Q9BQA9 187 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 CHCHD6Q9BRQ6 235 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 OR6C70A6NIJ9 312 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 SGTAO43765 313 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 CSF2P04141 144 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 KLK1P06870 262 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 CD36P16671 472 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 PDHA2P29803 388 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 POLR2IP36954 125 aaKnown RBP10.45□□□□□ -0.74
FAM3A-221ENST00000612856 HNRNPFP52597 415 aaKnown RBP10.45□□□□□ -0.74
FAM3A-221ENST00000612856 OLR1P78380 273 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 TBRG1Q3YBR2 411 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 CYP27C1Q4G0S4 372 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 SULT1C3Q6IMI6 304 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 ZNF655Q8N720 491 aaPredicted RBP10.45□□□□□ -0.74
FAM3A-221ENST00000612856 AMER2Q8N7J2 671 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 BTN2A2Q8WVV5 523 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 TMBIM1Q969X1 311 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 WDR92Q96MX6 357 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 ZNF641Q96N77 438 aaPredicted RBP10.45□□□□□ -0.74
FAM3A-221ENST00000612856 SLC2A11Q9BYW1 496 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 IL21Q9HBE4 155 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 TM7SF3Q9NS93 570 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 STARD5Q9NSY2 213 aa10.45□□□□□ -0.74
FAM3A-221ENST00000612856 EFCAB9A8MZ26 197 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 ADH1BP00325 375 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 ZNF10P21506 573 aaPredicted RBP10.44□□□□□ -0.74
FAM3A-221ENST00000612856 AKR1D1P51857 326 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 VSX2P58304 361 aaPredicted RBP10.44□□□□□ -0.74
FAM3A-221ENST00000612856 ZNF33AQ06730 810 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 LCP2Q13094 533 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 NAB1Q13506 487 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 CLPPQ16740 277 aaPredicted RBP10.44□□□□□ -0.74
FAM3A-221ENST00000612856 DEFB134Q4QY38 66 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 ARMCX4Q5H9R4 360 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 PRAMEF13Q5VWM6 474 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 DHRS4L2Q6PKH6 230 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 OR4N5Q8IXE1 308 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 LRRC20Q8TCA0 184 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 RHBDD1Q8TEB9 315 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 PTCD2Q8WV60 388 aaKnown RBP10.44□□□□□ -0.74
FAM3A-221ENST00000612856 ANKRD49Q8WVL7 239 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 DCSTAMPQ9H295 470 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 SMOC1Q9H4F8 434 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 ZNF556Q9HAH1 456 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 SARDHQ9UL12 918 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 SLC9A8Q9Y2E8 581 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 DNMT3AQ9Y6K1 912 aaPredicted RBP10.44□□□□□ -0.74
FAM3A-221ENST00000612856 H3BN98 237 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 NOS1APO75052 506 aaPredicted RBP10.44□□□□□ -0.74
FAM3A-221ENST00000612856 MATN4O95460 622 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 ZNF267Q14586 743 aaPredicted RBP10.44□□□□□ -0.74
FAM3A-221ENST00000612856 ACAP2Q15057 778 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 FAM174BQ3ZCQ3 159 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 AGAP7PQ5VUJ5 663 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 MED27Q6P2C8 311 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 LIPIQ6XZB0 460 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 CELF2-AS1Q8N7Q2 184 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 OR5AR1Q8NGP9 310 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 PIK3R3Q92569 461 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 OR2M4Q96R27 311 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 CPEB1Q9BZB8 566 aaKnown RBP10.44□□□□□ -0.74
FAM3A-221ENST00000612856 CNOT11Q9UKZ1 510 aaKnown RBP10.44□□□□□ -0.74
FAM3A-221ENST00000612856 ZCWPW2A0A1B0GU75 182 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 PI15O43692 258 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 JMJD7P0C870 316 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 PIM1P11309 404 aaPredicted RBP10.44□□□□□ -0.74
FAM3A-221ENST00000612856 OGNP20774 298 aaKnown RBP10.44□□□□□ -0.74
FAM3A-221ENST00000612856 TGFBR1P36897 503 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 FEN1P39748 380 aaKnown RBP10.44□□□□□ -0.74
FAM3A-221ENST00000612856 GPNMBQ14956 572 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 CXorf57Q6NSI4 855 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms