RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 PLPP1O14494 284 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 HAT1O14929 419 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 BCAT2O15382 392 aaPredicted RBP8.51□□□□□ -1.05
CCDC47-207ENST00000612558 TNFSF14O43557 240 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 DNAJA2O60884 412 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 FKBP9O95302 570 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 BSGP35613 385 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 BCL6P41182 706 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 GRIA3P42263 894 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 MAP2K3P46734 347 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 TRPC1P48995 793 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 CSNK1EP49674 416 aaKnown RBP8.51□□□□□ -1.05
CCDC47-207ENST00000612558 AFF3P51826 1226 aaKnown RBP8.51□□□□□ -1.05
CCDC47-207ENST00000612558 C21orf59P57076 290 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 HNRNPKP61978 463 aaKnown RBP eCLIP8.51□□□□□ -1.05
CCDC47-207ENST00000612558 PLIN5Q00G26 463 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 HHEXQ03014 270 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 LIPEQ05469 1076 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 SLC34A1Q06495 639 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 BNIP2Q12982 314 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 ZIC1Q15915 447 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 RABL3Q5HYI8 236 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 CCNYL2Q5T2Q4 361 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 LRIF1Q5T3J3 769 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 CPTPQ5TA50 214 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 OR4F3Q6IEY1 312 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 TMEM26Q6ZUK4 368 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 IKBIPQ70UQ0 350 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 PLD3Q8IV08 490 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 TMEM132CQ8N3T6 1108 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 MFSD9Q8NBP5 474 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 FAM156AQ8NDB6 213 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 HIPK4Q8NE63 616 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 VPS37AQ8NEZ2 397 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 BHLHE22Q8NFJ8 381 aaPredicted RBP8.51□□□□□ -1.05
CCDC47-207ENST00000612558 OR7A2PQ8NGA2 310 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 CDC26Q8NHZ8 85 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 FLVCR1-AS1Q8TAF5 88 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 LMX1AQ8TE12 382 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 C16orf78Q8WTQ4 265 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 EDAQ92838 391 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 ZUFSPQ96AP4 578 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 COQ8BQ96D53 544 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 ANKRD27Q96NW4 1050 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 DUSP26Q9BV47 211 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 REXO4Q9GZR2 422 aaKnown RBP8.51□□□□□ -1.05
CCDC47-207ENST00000612558 PCDHAC1Q9H158 963 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 MUC13Q9H3R2 512 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 ALG2Q9H553 416 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 REEP4Q9H6H4 257 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 MYNNQ9NPC7 610 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 SERHLQ9NQF3 203 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 FAM120CQ9NX05 1096 aaKnown RBP8.51□□□□□ -1.05
CCDC47-207ENST00000612558 ACTR10Q9NZ32 417 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 VAPAQ9P0L0 249 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 ANKMY1Q9P2S6 941 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 ATP6V1HQ9UI12 483 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 ADAM29Q9UKF5 820 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 DOLKQ9UPQ8 538 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 AP3M1Q9Y2T2 418 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 THADAQ6YHU6 1953 aa8.51□□□□□ -1.05
CCDC47-207ENST00000612558 PRSS51A0A1B0GVH4 220 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 ARHGAP10A1A4S6 786 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 GSAPA4D1B5 854 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 LRIT2A6NDA9 550 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 C2orf74A8MZ97 194 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 B4DGG1 531 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 RFXANKO14593 260 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 YY2O15391 372 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 NDUFS4O43181 175 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 ZW10O43264 779 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 DFNA5O60443 496 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 SCN2BO60939 215 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 KLHL18O94889 574 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 ANP32DO95626 131 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 PDGFBP01127 241 aaPredicted RBP8.5□□□□□ -1.05
CCDC47-207ENST00000612558 GBAP04062 536 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 SERPIND1P05546 499 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 LAMP1P11279 417 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 PIM1P11309 404 aaPredicted RBP8.5□□□□□ -1.05
CCDC47-207ENST00000612558 UGT2B7P16662 529 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 POLR2CP19387 275 aaPredicted RBP8.5□□□□□ -1.05
CCDC47-207ENST00000612558 HTR1EP28566 365 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 TPP2P29144 1249 aaPredicted RBP8.5□□□□□ -1.05
CCDC47-207ENST00000612558 GSTM5P46439 218 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 ERFP50548 548 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 ARFIP1P53367 373 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 WNT3P56703 355 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 TAS2R50P59544 299 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 RPS15AP62244 130 aaKnown RBP8.5□□□□□ -1.05
CCDC47-207ENST00000612558 C2orf80Q0P641 193 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 LRRC74AQ0VAA2 488 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 SLC5A12Q1EHB4 618 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 DUOXA1Q1HG43 343 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 RUNDC3AQ59EK9 446 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 ANXA8L1Q5VT79 327 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 FAM71E1Q6IPT2 247 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 ZFP1Q6P2D0 407 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 TSSK4Q6SA08 328 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 WDR5BQ86VZ2 330 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms