RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 PHACTR1Q9C0D0 580 aa16.31■□□□□ 0.2
PRKN-209ENST00000612485 KLHL31Q9H511 634 aa16.31■□□□□ 0.2
PRKN-209ENST00000612485 CNOT10Q9H9A5 744 aaKnown RBP16.31■□□□□ 0.2
PRKN-209ENST00000612485 CAB39LQ9H9S4 337 aa16.31■□□□□ 0.2
PRKN-209ENST00000612485 GPRC5BQ9NZH0 403 aa16.31■□□□□ 0.2
PRKN-209ENST00000612485 UTP11Q9Y3A2 253 aaKnown RBP16.31■□□□□ 0.2
PRKN-209ENST00000612485 PCDHGB6Q9Y5F9 930 aa16.31■□□□□ 0.2
PRKN-209ENST00000612485 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.31■□□□□ 0.2
PRKN-209ENST00000612485 TCRBV9S1A1TA0A576 114 aa16.3■□□□□ 0.2
PRKN-209ENST00000612485 CTAGE15A4D2H0 777 aa16.3■□□□□ 0.2
PRKN-209ENST00000612485 NCF1BA6NI72 391 aaPredicted RBP16.3■□□□□ 0.2
PRKN-209ENST00000612485 NCF1CA8MVU1 366 aaPredicted RBP16.3■□□□□ 0.2
PRKN-209ENST00000612485 CCDC166P0CW27 439 aa16.3■□□□□ 0.2
PRKN-209ENST00000612485 NCF1P14598 390 aaPredicted RBP16.3■□□□□ 0.2
PRKN-209ENST00000612485 STMN1P16949 149 aa16.3■□□□□ 0.2
PRKN-209ENST00000612485 GDF5P43026 501 aa16.3■□□□□ 0.2
PRKN-209ENST00000612485 CAV1Q03135 178 aa16.3■□□□□ 0.2
PRKN-209ENST00000612485 TUBA3CQ13748 450 aa16.3■□□□□ 0.2
PRKN-209ENST00000612485 SLBPQ14493 270 aaKnown RBP eCLIP16.3■□□□□ 0.2
PRKN-209ENST00000612485 C18orf21Q32NC0 220 aaPredicted RBP16.3■□□□□ 0.2
PRKN-209ENST00000612485 CDKL4Q5MAI5 379 aa16.3■□□□□ 0.2
PRKN-209ENST00000612485 TUBA3EQ6PEY2 450 aa16.3■□□□□ 0.2
PRKN-209ENST00000612485 GFRALQ6UXV0 394 aa16.3■□□□□ 0.2
PRKN-209ENST00000612485 TMIGD1Q6UXZ0 262 aa16.3■□□□□ 0.2
PRKN-209ENST00000612485 SLCO4C1Q6ZQN7 724 aa16.3■□□□□ 0.2
PRKN-209ENST00000612485 C3orf62Q6ZUJ4 267 aa16.3■□□□□ 0.2
PRKN-209ENST00000612485 CTAGE6Q86UF2 777 aa16.3■□□□□ 0.2
PRKN-209ENST00000612485 GPSM1Q86YR5 675 aa16.3■□□□□ 0.2
PRKN-209ENST00000612485 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.3■□□□□ 0.2
PRKN-209ENST00000612485 LGI4Q8N135 537 aa16.3■□□□□ 0.2
PRKN-209ENST00000612485 ARMC2Q8NEN0 867 aa16.3■□□□□ 0.2
PRKN-209ENST00000612485 SEC16BQ96JE7 1060 aa16.3■□□□□ 0.2
PRKN-209ENST00000612485 FAR2Q96K12 515 aa16.3■□□□□ 0.2
PRKN-209ENST00000612485 UNKQ9C0B0 810 aaKnown RBP16.3■□□□□ 0.2
PRKN-209ENST00000612485 PITHD1Q9GZP4 211 aaPredicted RBP16.3■□□□□ 0.2
PRKN-209ENST00000612485 RAB17Q9H0T7 212 aa16.3■□□□□ 0.2
PRKN-209ENST00000612485 PRDM9Q9NQV7 894 aa16.3■□□□□ 0.2
PRKN-209ENST00000612485 WWOXQ9NZC7 414 aa16.3■□□□□ 0.2
PRKN-209ENST00000612485 GRHL1Q9NZI5 618 aa16.3■□□□□ 0.2
PRKN-209ENST00000612485 SVILO95425 2214 aa16.3■□□□□ 0.2
PRKN-209ENST00000612485 FAM159BA6NKW6 160 aa16.29■□□□□ 0.2
PRKN-209ENST00000612485 CDK2AP1O14519 115 aa16.29■□□□□ 0.2
PRKN-209ENST00000612485 CLGNO14967 610 aa16.29■□□□□ 0.2
PRKN-209ENST00000612485 PHGDHO43175 533 aaKnown RBP16.29■□□□□ 0.2
PRKN-209ENST00000612485 CD1DP15813 335 aa16.29■□□□□ 0.2
PRKN-209ENST00000612485 HPDP32754 393 aaPredicted RBP16.29■□□□□ 0.2
PRKN-209ENST00000612485 GGT5P36269 586 aa16.29■□□□□ 0.2
PRKN-209ENST00000612485 KCNK10P57789 538 aa16.29■□□□□ 0.2
PRKN-209ENST00000612485 SULT1C3Q6IMI6 304 aa16.29■□□□□ 0.2
PRKN-209ENST00000612485 CTAGE3PQ8IX95 158 aa16.29■□□□□ 0.2
PRKN-209ENST00000612485 CYP4X1Q8N118 509 aa16.29■□□□□ 0.2
PRKN-209ENST00000612485 CA13Q8N1Q1 262 aa16.29■□□□□ 0.2
PRKN-209ENST00000612485 SPATA6LQ8N4H0 392 aa16.29■□□□□ 0.2
PRKN-209ENST00000612485 HORMAD2Q8N7B1 307 aa16.29■□□□□ 0.2
PRKN-209ENST00000612485 ELP5Q8TE02 316 aa16.29■□□□□ 0.2
PRKN-209ENST00000612485 CCT6BQ92526 530 aa16.29■□□□□ 0.2
PRKN-209ENST00000612485 GAL3ST3Q96A11 431 aa16.29■□□□□ 0.2
PRKN-209ENST00000612485 RHBGQ9H310 441 aa16.29■□□□□ 0.2
PRKN-209ENST00000612485 NT5DC2Q9H857 520 aa16.29■□□□□ 0.2
PRKN-209ENST00000612485 DNAJC11Q9NVH1 559 aa16.29■□□□□ 0.2
PRKN-209ENST00000612485 COPG2Q9UBF2 871 aa16.29■□□□□ 0.2
PRKN-209ENST00000612485 ZGRF1Q86YA3 2104 aa16.28■□□□□ 0.2
PRKN-209ENST00000612485 A0A088AWK7 358 aa16.28■□□□□ 0.2
PRKN-209ENST00000612485 SAGE2PA6NJ88 616 aa16.28■□□□□ 0.2
PRKN-209ENST00000612485 GABRR3A8MPY1 467 aa16.28■□□□□ 0.2
PRKN-209ENST00000612485 TAPBPO15533 448 aa16.28■□□□□ 0.2
PRKN-209ENST00000612485 CD46P15529 392 aa16.28■□□□□ 0.2
PRKN-209ENST00000612485 ZNF10P21506 573 aaPredicted RBP16.28■□□□□ 0.2
PRKN-209ENST00000612485 SPRP35270 261 aaPredicted RBP16.28■□□□□ 0.2
PRKN-209ENST00000612485 CD96P40200 585 aa16.28■□□□□ 0.2
PRKN-209ENST00000612485 PLTPP55058 493 aa16.28■□□□□ 0.2
PRKN-209ENST00000612485 RAB10P61026 200 aa16.28■□□□□ 0.2
PRKN-209ENST00000612485 BTN3A2P78410 334 aa16.28■□□□□ 0.2
PRKN-209ENST00000612485 BTG2P78543 158 aa16.28■□□□□ 0.2
PRKN-209ENST00000612485 OR1C1Q15619 314 aa16.28■□□□□ 0.2
PRKN-209ENST00000612485 ZKSCAN8Q15776 578 aaPredicted RBP16.28■□□□□ 0.2
PRKN-209ENST00000612485 GRTP1Q5TC63 336 aa16.28■□□□□ 0.2
PRKN-209ENST00000612485 MDS2Q8NDY4 140 aa16.28■□□□□ 0.2
PRKN-209ENST00000612485 NPAS2Q99743 824 aa16.28■□□□□ 0.2
PRKN-209ENST00000612485 TMEM79Q9BSE2 394 aa16.28■□□□□ 0.2
PRKN-209ENST00000612485 NPLQ9BXD5 320 aaPredicted RBP16.28■□□□□ 0.2
PRKN-209ENST00000612485 EHD1Q9H4M9 534 aa16.28■□□□□ 0.2
PRKN-209ENST00000612485 SEC14L3Q9UDX4 400 aa16.28■□□□□ 0.2
PRKN-209ENST00000612485 MMACHCQ9Y4U1 282 aa16.28■□□□□ 0.2
PRKN-209ENST00000612485 UNC79Q9P2D8 2635 aa16.27■□□□□ 0.2
PRKN-209ENST00000612485 TCRBV16S1A1N1A0A5B0 115 aa16.27■□□□□ 0.2
PRKN-209ENST00000612485 LRIT2A6NDA9 550 aa16.27■□□□□ 0.2
PRKN-209ENST00000612485 ANKDD1BA6NHY2 528 aa16.27■□□□□ 0.2
PRKN-209ENST00000612485 C4orf51C9J302 202 aa16.27■□□□□ 0.2
PRKN-209ENST00000612485 ERI3O43414 337 aaKnown RBP16.27■□□□□ 0.2
PRKN-209ENST00000612485 CLEC3AO75596 197 aa16.27■□□□□ 0.2
PRKN-209ENST00000612485 STK16O75716 305 aa16.27■□□□□ 0.2
PRKN-209ENST00000612485 UNC5CO95185 931 aa16.27■□□□□ 0.2
PRKN-209ENST00000612485 S100BP04271 92 aaPredicted RBP16.27■□□□□ 0.2
PRKN-209ENST00000612485 MAOAP21397 527 aa16.27■□□□□ 0.2
PRKN-209ENST00000612485 MST1P26927 711 aa16.27■□□□□ 0.2
PRKN-209ENST00000612485 STX2P32856 288 aa16.27■□□□□ 0.2
PRKN-209ENST00000612485 HSPA7P48741 367 aa16.27■□□□□ 0.2
PRKN-209ENST00000612485 GPX6P59796 221 aa16.27■□□□□ 0.2
PRKN-209ENST00000612485 ETF1P62495 437 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms