RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	SLC17A9	Q9BYT1	436 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	WDR26	Q9H7D7	661 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	DAPK2	Q9UIK4	370 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	GPR34	Q9UPC5	381 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	PCDHGB1	Q9Y5G3	927 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	TMEM202	A6NGA9	273 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	SLC22A1	O15245	554 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	TPD52L2	O43399	206 aa	Known RBP	13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	CNOT3	O75175	753 aa	Known RBP	13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	CD22	P20273	847 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	MAPK10	P53779	464 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	CDK3	Q00526	305 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	ZC3H12B	Q5HYM0	836 aa	Known RBP	13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	DOK6	Q6PKX4	331 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	TMEM92	Q6UXU6	159 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	SLC16A12	Q6ZSM3	486 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	KLHDC8A	Q8IYD2	350 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	SLC22A15	Q8IZD6	547 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	EID3	Q8N140	333 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	RNF175	Q8N4F7	328 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	HMGB4	Q8WW32	186 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	KLK6	Q92876	244 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	TAMM41	Q96BW9	452 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	SHD	Q96IW2	340 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	C1QTNF2	Q9BXJ5	285 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	AKIP1	Q9NQ31	210 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	PHPT1	Q9NRX4	125 aa	Predicted RBP	13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	VPS29	Q9UBQ0	182 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	C3orf18	Q9UK00	162 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	ZFR2	Q9UPR6	939 aa	Known RBP	13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	PCDHGA8	Q9Y5G5	932 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	EVPLL	A8MZ36	301 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	UGT2B11	O75310	529 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	IL7R	P16871	459 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	NDUFV2	P19404	249 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	RYK	P34925	604 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	SERPINB10	P48595	397 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	DGKE	P52429	567 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	MLLT10	P55197	1068 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	TFF2	Q03403	129 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	VAC14	Q08AM6	782 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	DOC2A	Q14183	400 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	SPCS2	Q15005	226 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	AGTRAP	Q6RW13	159 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	SPESP1	Q6UW49	350 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	SERPINA11	Q86U17	422 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	FLCN	Q8NFG4	579 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	GLMN	Q92990	594 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	FAM131C	Q96AQ9	280 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	NODAL	Q96S42	347 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	BTBD1	Q9H0C5	482 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	NECTIN3	Q9NQS3	549 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	TRPM6	Q9BX84	2022 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	EYS	Q5T1H1	3165 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	KRBA1	A5PL33	1030 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	LRRC72	A6NJI9	287 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	FPGT	O14772	594 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	NOBOX	O60393	691 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	GABARAP	O95166	117 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	CAT	P04040	527 aa	Known RBP	13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	HTR1A	P08908	422 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	MAT2A	P31153	395 aa	Known RBP	13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	DCT	P40126	519 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	HNF4A	P41235	474 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	TMED10	P49755	219 aa	Known RBP	13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	AQP6	Q13520	282 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	NAE1	Q13564	534 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	IRF4	Q15306	451 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	UGT8	Q16880	541 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	GRHL2	Q6ISB3	625 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	ZNF551	Q7Z340	670 aa	Predicted RBP	13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	CFAP206	Q8IYR0	622 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	HS3ST5	Q8IZT8	346 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	SYNPO	Q8N3V7	929 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	OR7A2P	Q8NGA2	310 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	REXO4	Q9GZR2	422 aa	Known RBP	13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	STOX2	Q9P2F5	926 aa	Predicted RBP	13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	RUVBL1	Q9Y265	456 aa	Known RBP	13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	TMEM98	Q9Y2Y6	226 aa		13.33	□□□□□ -0.28
COPS7B-223	ENST00000611614	SLC5A10	A0PJK1	596 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	ZNF99	A8MXY4	864 aa	Predicted RBP	13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614		E7EQ34	232 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614		H3BM21	787 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	SLC16A6	O15403	523 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	NDUFS2	O75306	463 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	E2F6	O75461	281 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	CCNDBP1	O95273	360 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	ZNF8	P17098	575 aa	Predicted RBP	13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	HTR1B	P28222	390 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	TEAD1	P28347	426 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	IDUA	P35475	653 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	RAD23A	P54725	363 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	PCDH1	Q08174	1060 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	CD47	Q08722	323 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	CYP2A13	Q16696	494 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	TMEM179B	Q7Z7N9	219 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	FBLIM1	Q8WUP2	373 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	COX14	Q96I36	57 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms