RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 UTP23Q9BRU9 249 aaKnown RBP16.31■□□□□ 0.2
PRKN-208ENST00000610470 PHACTR1Q9C0D0 580 aa16.31■□□□□ 0.2
PRKN-208ENST00000610470 KLHL31Q9H511 634 aa16.31■□□□□ 0.2
PRKN-208ENST00000610470 CNOT10Q9H9A5 744 aaKnown RBP16.31■□□□□ 0.2
PRKN-208ENST00000610470 CAB39LQ9H9S4 337 aa16.31■□□□□ 0.2
PRKN-208ENST00000610470 GPRC5BQ9NZH0 403 aa16.31■□□□□ 0.2
PRKN-208ENST00000610470 UTP11Q9Y3A2 253 aaKnown RBP16.31■□□□□ 0.2
PRKN-208ENST00000610470 PCDHGB6Q9Y5F9 930 aa16.31■□□□□ 0.2
PRKN-208ENST00000610470 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.31■□□□□ 0.2
PRKN-208ENST00000610470 TCRBV9S1A1TA0A576 114 aa16.3■□□□□ 0.2
PRKN-208ENST00000610470 CTAGE15A4D2H0 777 aa16.3■□□□□ 0.2
PRKN-208ENST00000610470 NCF1BA6NI72 391 aaPredicted RBP16.3■□□□□ 0.2
PRKN-208ENST00000610470 NCF1CA8MVU1 366 aaPredicted RBP16.3■□□□□ 0.2
PRKN-208ENST00000610470 CCDC166P0CW27 439 aa16.3■□□□□ 0.2
PRKN-208ENST00000610470 NCF1P14598 390 aaPredicted RBP16.3■□□□□ 0.2
PRKN-208ENST00000610470 STMN1P16949 149 aa16.3■□□□□ 0.2
PRKN-208ENST00000610470 GDF5P43026 501 aa16.3■□□□□ 0.2
PRKN-208ENST00000610470 CAV1Q03135 178 aa16.3■□□□□ 0.2
PRKN-208ENST00000610470 TUBA3CQ13748 450 aa16.3■□□□□ 0.2
PRKN-208ENST00000610470 SLBPQ14493 270 aaKnown RBP eCLIP16.3■□□□□ 0.2
PRKN-208ENST00000610470 C18orf21Q32NC0 220 aaPredicted RBP16.3■□□□□ 0.2
PRKN-208ENST00000610470 CDKL4Q5MAI5 379 aa16.3■□□□□ 0.2
PRKN-208ENST00000610470 TUBA3EQ6PEY2 450 aa16.3■□□□□ 0.2
PRKN-208ENST00000610470 GFRALQ6UXV0 394 aa16.3■□□□□ 0.2
PRKN-208ENST00000610470 TMIGD1Q6UXZ0 262 aa16.3■□□□□ 0.2
PRKN-208ENST00000610470 SLCO4C1Q6ZQN7 724 aa16.3■□□□□ 0.2
PRKN-208ENST00000610470 C3orf62Q6ZUJ4 267 aa16.3■□□□□ 0.2
PRKN-208ENST00000610470 CTAGE6Q86UF2 777 aa16.3■□□□□ 0.2
PRKN-208ENST00000610470 GPSM1Q86YR5 675 aa16.3■□□□□ 0.2
PRKN-208ENST00000610470 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.3■□□□□ 0.2
PRKN-208ENST00000610470 LGI4Q8N135 537 aa16.3■□□□□ 0.2
PRKN-208ENST00000610470 ARMC2Q8NEN0 867 aa16.3■□□□□ 0.2
PRKN-208ENST00000610470 SEC16BQ96JE7 1060 aa16.3■□□□□ 0.2
PRKN-208ENST00000610470 FAR2Q96K12 515 aa16.3■□□□□ 0.2
PRKN-208ENST00000610470 UNKQ9C0B0 810 aaKnown RBP16.3■□□□□ 0.2
PRKN-208ENST00000610470 PITHD1Q9GZP4 211 aaPredicted RBP16.3■□□□□ 0.2
PRKN-208ENST00000610470 RAB17Q9H0T7 212 aa16.3■□□□□ 0.2
PRKN-208ENST00000610470 PRDM9Q9NQV7 894 aa16.3■□□□□ 0.2
PRKN-208ENST00000610470 WWOXQ9NZC7 414 aa16.3■□□□□ 0.2
PRKN-208ENST00000610470 GRHL1Q9NZI5 618 aa16.3■□□□□ 0.2
PRKN-208ENST00000610470 SVILO95425 2214 aa16.3■□□□□ 0.2
PRKN-208ENST00000610470 FAM159BA6NKW6 160 aa16.29■□□□□ 0.2
PRKN-208ENST00000610470 CDK2AP1O14519 115 aa16.29■□□□□ 0.2
PRKN-208ENST00000610470 CLGNO14967 610 aa16.29■□□□□ 0.2
PRKN-208ENST00000610470 PHGDHO43175 533 aaKnown RBP16.29■□□□□ 0.2
PRKN-208ENST00000610470 CD1DP15813 335 aa16.29■□□□□ 0.2
PRKN-208ENST00000610470 HPDP32754 393 aaPredicted RBP16.29■□□□□ 0.2
PRKN-208ENST00000610470 GGT5P36269 586 aa16.29■□□□□ 0.2
PRKN-208ENST00000610470 KCNK10P57789 538 aa16.29■□□□□ 0.2
PRKN-208ENST00000610470 SULT1C3Q6IMI6 304 aa16.29■□□□□ 0.2
PRKN-208ENST00000610470 CTAGE3PQ8IX95 158 aa16.29■□□□□ 0.2
PRKN-208ENST00000610470 CYP4X1Q8N118 509 aa16.29■□□□□ 0.2
PRKN-208ENST00000610470 CA13Q8N1Q1 262 aa16.29■□□□□ 0.2
PRKN-208ENST00000610470 SPATA6LQ8N4H0 392 aa16.29■□□□□ 0.2
PRKN-208ENST00000610470 HORMAD2Q8N7B1 307 aa16.29■□□□□ 0.2
PRKN-208ENST00000610470 ELP5Q8TE02 316 aa16.29■□□□□ 0.2
PRKN-208ENST00000610470 CCT6BQ92526 530 aa16.29■□□□□ 0.2
PRKN-208ENST00000610470 GAL3ST3Q96A11 431 aa16.29■□□□□ 0.2
PRKN-208ENST00000610470 RHBGQ9H310 441 aa16.29■□□□□ 0.2
PRKN-208ENST00000610470 NT5DC2Q9H857 520 aa16.29■□□□□ 0.2
PRKN-208ENST00000610470 DNAJC11Q9NVH1 559 aa16.29■□□□□ 0.2
PRKN-208ENST00000610470 COPG2Q9UBF2 871 aa16.29■□□□□ 0.2
PRKN-208ENST00000610470 ZGRF1Q86YA3 2104 aa16.28■□□□□ 0.2
PRKN-208ENST00000610470 A0A088AWK7 358 aa16.28■□□□□ 0.2
PRKN-208ENST00000610470 SAGE2PA6NJ88 616 aa16.28■□□□□ 0.2
PRKN-208ENST00000610470 GABRR3A8MPY1 467 aa16.28■□□□□ 0.2
PRKN-208ENST00000610470 TAPBPO15533 448 aa16.28■□□□□ 0.2
PRKN-208ENST00000610470 CD46P15529 392 aa16.28■□□□□ 0.2
PRKN-208ENST00000610470 ZNF10P21506 573 aaPredicted RBP16.28■□□□□ 0.2
PRKN-208ENST00000610470 SPRP35270 261 aaPredicted RBP16.28■□□□□ 0.2
PRKN-208ENST00000610470 CD96P40200 585 aa16.28■□□□□ 0.2
PRKN-208ENST00000610470 PLTPP55058 493 aa16.28■□□□□ 0.2
PRKN-208ENST00000610470 RAB10P61026 200 aa16.28■□□□□ 0.2
PRKN-208ENST00000610470 BTN3A2P78410 334 aa16.28■□□□□ 0.2
PRKN-208ENST00000610470 BTG2P78543 158 aa16.28■□□□□ 0.2
PRKN-208ENST00000610470 OR1C1Q15619 314 aa16.28■□□□□ 0.2
PRKN-208ENST00000610470 ZKSCAN8Q15776 578 aaPredicted RBP16.28■□□□□ 0.2
PRKN-208ENST00000610470 GRTP1Q5TC63 336 aa16.28■□□□□ 0.2
PRKN-208ENST00000610470 MDS2Q8NDY4 140 aa16.28■□□□□ 0.2
PRKN-208ENST00000610470 NPAS2Q99743 824 aa16.28■□□□□ 0.2
PRKN-208ENST00000610470 TMEM79Q9BSE2 394 aa16.28■□□□□ 0.2
PRKN-208ENST00000610470 NPLQ9BXD5 320 aaPredicted RBP16.28■□□□□ 0.2
PRKN-208ENST00000610470 EHD1Q9H4M9 534 aa16.28■□□□□ 0.2
PRKN-208ENST00000610470 SEC14L3Q9UDX4 400 aa16.28■□□□□ 0.2
PRKN-208ENST00000610470 MMACHCQ9Y4U1 282 aa16.28■□□□□ 0.2
PRKN-208ENST00000610470 UNC79Q9P2D8 2635 aa16.27■□□□□ 0.2
PRKN-208ENST00000610470 TCRBV16S1A1N1A0A5B0 115 aa16.27■□□□□ 0.2
PRKN-208ENST00000610470 LRIT2A6NDA9 550 aa16.27■□□□□ 0.2
PRKN-208ENST00000610470 ANKDD1BA6NHY2 528 aa16.27■□□□□ 0.2
PRKN-208ENST00000610470 C4orf51C9J302 202 aa16.27■□□□□ 0.2
PRKN-208ENST00000610470 ERI3O43414 337 aaKnown RBP16.27■□□□□ 0.2
PRKN-208ENST00000610470 CLEC3AO75596 197 aa16.27■□□□□ 0.2
PRKN-208ENST00000610470 STK16O75716 305 aa16.27■□□□□ 0.2
PRKN-208ENST00000610470 UNC5CO95185 931 aa16.27■□□□□ 0.2
PRKN-208ENST00000610470 S100BP04271 92 aaPredicted RBP16.27■□□□□ 0.2
PRKN-208ENST00000610470 MAOAP21397 527 aa16.27■□□□□ 0.2
PRKN-208ENST00000610470 MST1P26927 711 aa16.27■□□□□ 0.2
PRKN-208ENST00000610470 STX2P32856 288 aa16.27■□□□□ 0.2
PRKN-208ENST00000610470 HSPA7P48741 367 aa16.27■□□□□ 0.2
PRKN-208ENST00000610470 GPX6P59796 221 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms