RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 MKL2Q9ULH7 1088 aa13.5□□□□□ -0.25
HDDC2-206ENST00000608461 PPT2Q9UMR5 302 aa13.5□□□□□ -0.25
HDDC2-206ENST00000608461 BOD1L1Q8NFC6 3051 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 SYNDIG1LA6NDD5 238 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 GLRA3O75311 464 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 RDH16O75452 317 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 CLDN9O95484 217 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 ATXN8OSP0DMR3 200 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 PYGBP11216 843 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 ICAM2P13598 275 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 EEF1DP29692 281 aaKnown RBP13.49□□□□□ -0.25
HDDC2-206ENST00000608461 PHEXP78562 749 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 MAT1AQ00266 395 aaKnown RBP13.49□□□□□ -0.25
HDDC2-206ENST00000608461 RCN2Q14257 317 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 SYT16Q17RD7 645 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 CCDC153Q494R4 210 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 TOR1AIP1Q5JTV8 583 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 CPZQ66K79 652 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 SHISA6Q6ZSJ9 500 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 SH2D5Q6ZV89 423 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 NDUFAF7Q7L592 441 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 VN1R5Q7Z5H4 357 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 GALNT16Q8N428 558 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 ZNF843Q8N446 348 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 PLPP5Q8NEB5 264 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 C7orf57Q8NEG2 295 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 ZNF473Q8WTR7 871 aaKnown RBP13.49□□□□□ -0.25
HDDC2-206ENST00000608461 CCT6BQ92526 530 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 TBC1D20Q96BZ9 403 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 CMTM7Q96FZ5 175 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 KCNC2Q96PR1 638 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 CENPKQ9BS16 269 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 TBCDQ9BTW9 1192 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 PARD6BQ9BYG5 372 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 GPR83Q9NYM4 423 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 TMEM216Q9P0N5 145 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 FBXL4Q9UKA2 621 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 PCTPQ9UKL6 214 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 GRID1Q9ULK0 1009 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 ZNF451Q9Y4E5 1061 aa13.49□□□□□ -0.25
HDDC2-206ENST00000608461 SMG1Q96Q15 3661 aaKnown RBP13.48□□□□□ -0.25
HDDC2-206ENST00000608461 SCN3AQ9NY46 2000 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 A8MT66 165 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 B8ZZF3 427 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 ERI3O43414 337 aaKnown RBP13.48□□□□□ -0.25
HDDC2-206ENST00000608461 CHST10O43529 356 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 ALOX12BO75342 701 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 C1QL1O75973 258 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 SIX3O95343 332 aaPredicted RBP13.48□□□□□ -0.25
HDDC2-206ENST00000608461 ALPPP05187 535 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 FHP07954 510 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 RPS17P08708 135 aaKnown RBP13.48□□□□□ -0.25
HDDC2-206ENST00000608461 SBK3P0C264 359 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 C8orf89P0DMQ9 161 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 RNH1P13489 461 aaKnown RBP13.48□□□□□ -0.25
HDDC2-206ENST00000608461 ATP5F1P24539 256 aaPredicted RBP13.48□□□□□ -0.25
HDDC2-206ENST00000608461 HNRNPH1P31943 449 aaKnown RBP13.48□□□□□ -0.25
HDDC2-206ENST00000608461 CRHR1P34998 444 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 CCNG1P51959 295 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 PGDP52209 483 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 RAB8AP61006 207 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 HERVK_113P63132 956 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 SNRPNP63162 240 aaKnown RBP13.48□□□□□ -0.25
HDDC2-206ENST00000608461 IFFO1Q0D2I5 559 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 COL9A2Q14055 689 aaPredicted RBP13.48□□□□□ -0.25
HDDC2-206ENST00000608461 MYBPC3Q14896 1274 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 GGTA1PQ4G0N0 100 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 IRAK1BP1Q5VVH5 260 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 ABHD17CQ6PCB6 329 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 PRSS58Q8IYP2 241 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 MYRIPQ8NFW9 859 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 ATP6V1E2Q96A05 226 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 SERINC2Q96SA4 455 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 SMAD5Q99717 465 aaKnown RBP13.48□□□□□ -0.25
HDDC2-206ENST00000608461 TMEM109Q9BVC6 243 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 ERVK-6Q9BXR3 956 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 MS4A8Q9BY19 250 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 VN1R1Q9GZP7 353 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 KLHL31Q9H511 634 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 NOL11Q9H8H0 719 aaKnown RBP13.48□□□□□ -0.25
HDDC2-206ENST00000608461 RIC8BQ9NVN3 520 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 HCN3Q9P1Z3 774 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 ANAPC2Q9UJX6 822 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 STK38LQ9Y2H1 464 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 COL6A6A6NMZ7 2263 aa13.48□□□□□ -0.25
HDDC2-206ENST00000608461 IGHV1-45A0A0A0MS14 117 aa13.47□□□□□ -0.25
HDDC2-206ENST00000608461 NSG1A0A0A6YYJ2 146 aa13.47□□□□□ -0.25
HDDC2-206ENST00000608461 A0A1W2PPM1 405 aa13.47□□□□□ -0.25
HDDC2-206ENST00000608461 MAGEB17A8MXT2 336 aa13.47□□□□□ -0.25
HDDC2-206ENST00000608461 PSMD12O00232 456 aaPredicted RBP13.47□□□□□ -0.25
HDDC2-206ENST00000608461 FOXE1O00358 373 aaPredicted RBP13.47□□□□□ -0.25
HDDC2-206ENST00000608461 B3GALT2O43825 422 aa13.47□□□□□ -0.25
HDDC2-206ENST00000608461 DNAJB5O75953 348 aa13.47□□□□□ -0.25
HDDC2-206ENST00000608461 TBX6O95947 436 aaPredicted RBP13.47□□□□□ -0.25
HDDC2-206ENST00000608461 OTCP00480 354 aa13.47□□□□□ -0.25
HDDC2-206ENST00000608461 IMPDH1P20839 514 aa13.47□□□□□ -0.25
HDDC2-206ENST00000608461 PTX3P26022 381 aaPredicted RBP13.47□□□□□ -0.25
HDDC2-206ENST00000608461 SLCO1A2P46721 670 aa13.47□□□□□ -0.25
HDDC2-206ENST00000608461 MTTPP55157 894 aa13.47□□□□□ -0.25
HDDC2-206ENST00000608461 FOXL2P58012 376 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms