RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 GABPB2Q8TAK5 448 aaPredicted RBP16.85■□□□□ 0.29
CHMP2A-208ENST00000601220 CREB3L4Q8TEY5 395 aa16.85■□□□□ 0.29
CHMP2A-208ENST00000601220 ATL1Q8WXF7 558 aa16.85■□□□□ 0.29
CHMP2A-208ENST00000601220 MAGED4Q96JG8 741 aa16.85■□□□□ 0.29
CHMP2A-208ENST00000601220 PWWP2AQ96N64 755 aa16.85■□□□□ 0.29
CHMP2A-208ENST00000601220 PTCHD1Q96NR3 888 aa16.85■□□□□ 0.29
CHMP2A-208ENST00000601220 PHF12Q96QT6 1004 aa16.85■□□□□ 0.29
CHMP2A-208ENST00000601220 DDX47Q9H0S4 455 aaKnown RBP16.85■□□□□ 0.29
CHMP2A-208ENST00000601220 NECTIN3Q9NQS3 549 aa16.85■□□□□ 0.29
CHMP2A-208ENST00000601220 ASB1Q9Y576 335 aa16.85■□□□□ 0.29
CHMP2A-208ENST00000601220 SAGE2PA6NJ88 616 aa16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 CES2O00748 559 aa16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 SLC25A12O75746 678 aa16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 MLYCDO95822 493 aa16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 ESRRAP11474 423 aaPredicted RBP16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 MAOAP21397 527 aa16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 ELK3P41970 407 aa16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 KIR3DL1P43629 444 aa16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 RAB8AP61006 207 aa16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 HSF1Q00613 529 aa16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 RGS1Q08116 209 aa16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 BBS9Q3SYG4 887 aa16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 STEAP4Q687X5 459 aa16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 NXPE4Q6UWF7 544 aa16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 ABHD13Q7L211 337 aa16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 GDF7Q7Z4P5 450 aa16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 THOC6Q86W42 341 aaKnown RBP16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 DOLPP1Q86YN1 238 aa16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 CPSF7Q8N684 471 aaKnown RBP16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 LURAP1Q96LR2 239 aa16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 TSNARE1Q96NA8 513 aa16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 TRIM54Q9BYV2 358 aa16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 PELI2Q9HAT8 420 aa16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 ASIC3Q9UHC3 531 aa16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 CORO1CQ9ULV4 474 aaPredicted RBP16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 SNX12Q9UMY4 172 aa16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 CLDN16Q9Y5I7 305 aa16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 TEP1Q99973 2627 aaKnown RBP16.84■□□□□ 0.29
CHMP2A-208ENST00000601220 CLDN14O95500 239 aa16.83■□□□□ 0.28
CHMP2A-208ENST00000601220 COX6B1P14854 86 aa16.83■□□□□ 0.28
CHMP2A-208ENST00000601220 HNF4AP41235 474 aa16.83■□□□□ 0.28
CHMP2A-208ENST00000601220 HLCSP50747 726 aa16.83■□□□□ 0.28
CHMP2A-208ENST00000601220 SMSP52788 366 aa16.83■□□□□ 0.28
CHMP2A-208ENST00000601220 SKP1P63208 163 aa16.83■□□□□ 0.28
CHMP2A-208ENST00000601220 FRG1Q14331 258 aaKnown RBP16.83■□□□□ 0.28
CHMP2A-208ENST00000601220 NCOA6Q14686 2063 aaPredicted RBP16.83■□□□□ 0.28
CHMP2A-208ENST00000601220 MAPKAPK3Q16644 382 aa16.83■□□□□ 0.28
CHMP2A-208ENST00000601220 HP1BP3Q5SSJ5 553 aaPredicted RBP16.83■□□□□ 0.28
CHMP2A-208ENST00000601220 FAM45BPQ6NSW5 357 aa16.83■□□□□ 0.28
CHMP2A-208ENST00000601220 CA13Q8N1Q1 262 aa16.83■□□□□ 0.28
CHMP2A-208ENST00000601220 TBC1D19Q8N5T2 526 aa16.83■□□□□ 0.28
CHMP2A-208ENST00000601220 ACBD4Q8NC06 268 aa16.83■□□□□ 0.28
CHMP2A-208ENST00000601220 APCDD1LQ8NCL9 501 aa16.83■□□□□ 0.28
CHMP2A-208ENST00000601220 FAM45AQ8TCE6 357 aa16.83■□□□□ 0.28
CHMP2A-208ENST00000601220 DMRTA2Q96SC8 542 aa16.83■□□□□ 0.28
CHMP2A-208ENST00000601220 PRDM9Q9NQV7 894 aa16.83■□□□□ 0.28
CHMP2A-208ENST00000601220 ZFATQ9P243 1243 aa16.83■□□□□ 0.28
CHMP2A-208ENST00000601220 SLC22A14Q9Y267 594 aa16.83■□□□□ 0.28
CHMP2A-208ENST00000601220 PSAT1Q9Y617 370 aa16.83■□□□□ 0.28
CHMP2A-208ENST00000601220 TEX264Q9Y6I9 313 aa16.83■□□□□ 0.28
CHMP2A-208ENST00000601220 GOLGA6L10A0A0M3HER8 536 aa16.82■□□□□ 0.28
CHMP2A-208ENST00000601220 CDC7O00311 574 aa16.82■□□□□ 0.28
CHMP2A-208ENST00000601220 TP73O15350 636 aa16.82■□□□□ 0.28
CHMP2A-208ENST00000601220 SERPINA6P08185 405 aa16.82■□□□□ 0.28
CHMP2A-208ENST00000601220 ZNF37AP17032 561 aaPredicted RBP16.82■□□□□ 0.28
CHMP2A-208ENST00000601220 CYB561P49447 251 aa16.82■□□□□ 0.28
CHMP2A-208ENST00000601220 CYP4X1Q8N118 509 aa16.82■□□□□ 0.28
CHMP2A-208ENST00000601220 GHDCQ8N2G8 530 aa16.82■□□□□ 0.28
CHMP2A-208ENST00000601220 FAM98AQ8NCA5 519 aaKnown RBP16.82■□□□□ 0.28
CHMP2A-208ENST00000601220 TRPV3Q8NET8 790 aa16.82■□□□□ 0.28
CHMP2A-208ENST00000601220 AGAP11Q8TF27 550 aa16.82■□□□□ 0.28
CHMP2A-208ENST00000601220 PHF10Q8WUB8 498 aaKnown RBP16.82■□□□□ 0.28
CHMP2A-208ENST00000601220 ANKRD7Q92527 254 aa16.82■□□□□ 0.28
CHMP2A-208ENST00000601220 MTFMTQ96DP5 389 aaKnown RBP16.82■□□□□ 0.28
CHMP2A-208ENST00000601220 PPANQ9NQ55 473 aaKnown RBP16.82■□□□□ 0.28
CHMP2A-208ENST00000601220 PPIEQ9UNP9 301 aaKnown RBP16.82■□□□□ 0.28
CHMP2A-208ENST00000601220 DCHS2Q6V1P9 2916 aa16.81■□□□□ 0.28
CHMP2A-208ENST00000601220 TBX6O95947 436 aaPredicted RBP16.81■□□□□ 0.28
CHMP2A-208ENST00000601220 RNH1P13489 461 aaKnown RBP16.81■□□□□ 0.28
CHMP2A-208ENST00000601220 GPR143P51810 404 aa16.81■□□□□ 0.28
CHMP2A-208ENST00000601220 ITGA8P53708 1063 aa16.81■□□□□ 0.28
CHMP2A-208ENST00000601220 CDKL1Q00532 357 aa16.81■□□□□ 0.28
CHMP2A-208ENST00000601220 CFAP36Q96G28 342 aa16.81■□□□□ 0.28
CHMP2A-208ENST00000601220 AIF1LQ9BQI0 150 aa16.81■□□□□ 0.28
CHMP2A-208ENST00000601220 MCMBPQ9BTE3 642 aa16.81■□□□□ 0.28
CHMP2A-208ENST00000601220 ZNF223Q9UK11 482 aaPredicted RBP16.81■□□□□ 0.28
CHMP2A-208ENST00000601220 CHMP2BQ9UQN3 213 aa16.81■□□□□ 0.28
CHMP2A-208ENST00000601220 DYRK1BQ9Y463 629 aa16.81■□□□□ 0.28
CHMP2A-208ENST00000601220 HRH3Q9Y5N1 445 aa16.81■□□□□ 0.28
CHMP2A-208ENST00000601220 KCNE2Q9Y6J6 123 aa16.81■□□□□ 0.28
CHMP2A-208ENST00000601220 PCNX1Q96RV3 2341 aa16.8■□□□□ 0.28
CHMP2A-208ENST00000601220 PKDREJQ9NTG1 2253 aa16.8■□□□□ 0.28
CHMP2A-208ENST00000601220 URADA6NGE7 173 aa16.8■□□□□ 0.28
CHMP2A-208ENST00000601220 A8MUA0 341 aa16.8■□□□□ 0.28
CHMP2A-208ENST00000601220 E9PLN8 166 aa16.8■□□□□ 0.28
CHMP2A-208ENST00000601220 TGFBR3LH3BV60 316 aa16.8■□□□□ 0.28
CHMP2A-208ENST00000601220 ZNF24P17028 368 aa16.8■□□□□ 0.28
CHMP2A-208ENST00000601220 PTGER1P34995 402 aa16.8■□□□□ 0.28
CHMP2A-208ENST00000601220 RUNX2Q13950 521 aa16.8■□□□□ 0.28
CHMP2A-208ENST00000601220 MORF4L2Q15014 288 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms