RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 LOC102723996A0A087X1L8 192 aa15.29■□□□□ 0.04
LSM4-206ENST00000600289 SGK494L7N484 410 aa15.29■□□□□ 0.04
LSM4-206ENST00000600289 UGDHO60701 494 aa15.29■□□□□ 0.04
LSM4-206ENST00000600289 ZNF888P0CJ79 500 aaPredicted RBP15.29■□□□□ 0.04
LSM4-206ENST00000600289 ATXN8OSP0DMR3 200 aa15.29■□□□□ 0.04
LSM4-206ENST00000600289 SERPINB1P30740 379 aa15.29■□□□□ 0.04
LSM4-206ENST00000600289 EMP2P54851 167 aa15.29■□□□□ 0.04
LSM4-206ENST00000600289 STXBP1P61764 594 aaKnown RBP15.29■□□□□ 0.04
LSM4-206ENST00000600289 MAT1AQ00266 395 aaKnown RBP15.29■□□□□ 0.04
LSM4-206ENST00000600289 CHIT1Q13231 466 aa15.29■□□□□ 0.04
LSM4-206ENST00000600289 PFKFB4Q16877 469 aa15.29■□□□□ 0.04
LSM4-206ENST00000600289 SYT16Q17RD7 645 aa15.29■□□□□ 0.04
LSM4-206ENST00000600289 TUBB8Q3ZCM7 444 aa15.29■□□□□ 0.04
LSM4-206ENST00000600289 TMEM205Q6UW68 189 aa15.29■□□□□ 0.04
LSM4-206ENST00000600289 SHISA6Q6ZSJ9 500 aa15.29■□□□□ 0.04
LSM4-206ENST00000600289 VN1R5Q7Z5H4 357 aa15.29■□□□□ 0.04
LSM4-206ENST00000600289 CLEC1AQ8NC01 280 aa15.29■□□□□ 0.04
LSM4-206ENST00000600289 OR11G2Q8NGC1 345 aa15.29■□□□□ 0.04
LSM4-206ENST00000600289 UBE2E3Q969T4 207 aa15.29■□□□□ 0.04
LSM4-206ENST00000600289 SLC25A23Q9BV35 468 aa15.29■□□□□ 0.04
LSM4-206ENST00000600289 AICDAQ9GZX7 198 aa15.29■□□□□ 0.04
LSM4-206ENST00000600289 FBXL4Q9UKA2 621 aa15.29■□□□□ 0.04
LSM4-206ENST00000600289 ZNF490Q9ULM2 529 aaPredicted RBP15.29■□□□□ 0.04
LSM4-206ENST00000600289 TP53TG5Q9Y2B4 290 aa15.29■□□□□ 0.04
LSM4-206ENST00000600289 TSC22D4Q9Y3Q8 395 aa15.29■□□□□ 0.04
LSM4-206ENST00000600289 LRIT2A6NDA9 550 aa15.28■□□□□ 0.04
LSM4-206ENST00000600289 ANKDD1BA6NHY2 528 aa15.28■□□□□ 0.04
LSM4-206ENST00000600289 E2F3O00716 465 aa15.28■□□□□ 0.04
LSM4-206ENST00000600289 RDH16O75452 317 aa15.28■□□□□ 0.04
LSM4-206ENST00000600289 TBX6O95947 436 aaPredicted RBP15.28■□□□□ 0.04
LSM4-206ENST00000600289 HPP00738 406 aa15.28■□□□□ 0.04
LSM4-206ENST00000600289 SERPIND1P05546 499 aa15.28■□□□□ 0.04
LSM4-206ENST00000600289 GSTA1P08263 222 aa15.28■□□□□ 0.04
LSM4-206ENST00000600289 ACPPP15309 386 aa15.28■□□□□ 0.04
LSM4-206ENST00000600289 HNF4AP41235 474 aa15.28■□□□□ 0.04
LSM4-206ENST00000600289 XCR1P46094 333 aa15.28■□□□□ 0.04
LSM4-206ENST00000600289 VSNL1P62760 191 aa15.28■□□□□ 0.04
LSM4-206ENST00000600289 AIMP2Q13155 320 aaKnown RBP15.28■□□□□ 0.04
LSM4-206ENST00000600289 HIST2H2ACQ16777 129 aaPredicted RBP15.28■□□□□ 0.04
LSM4-206ENST00000600289 HIST2H2AA3Q6FI13 130 aa15.28■□□□□ 0.04
LSM4-206ENST00000600289 GRHL2Q6ISB3 625 aa15.28■□□□□ 0.04
LSM4-206ENST00000600289 LAPTM4BQ86VI4 370 aa15.28■□□□□ 0.04
LSM4-206ENST00000600289 TMEM151AQ8N4L1 468 aa15.28■□□□□ 0.04
LSM4-206ENST00000600289 UBLCP1Q8WVY7 318 aaPredicted RBP15.28■□□□□ 0.04
LSM4-206ENST00000600289 SMAD5Q99717 465 aaKnown RBP15.28■□□□□ 0.04
LSM4-206ENST00000600289 YIPF2Q9BWQ6 316 aa15.28■□□□□ 0.04
LSM4-206ENST00000600289 C1QTNF3Q9BXJ4 246 aa15.28■□□□□ 0.04
LSM4-206ENST00000600289 ATP13A2Q9NQ11 1180 aa15.28■□□□□ 0.04
LSM4-206ENST00000600289 HCN3Q9P1Z3 774 aa15.28■□□□□ 0.04
LSM4-206ENST00000600289 CPSF2Q9P2I0 782 aaKnown RBP15.28■□□□□ 0.04
LSM4-206ENST00000600289 PLEKHB1Q9UF11 243 aaPredicted RBP15.28■□□□□ 0.04
LSM4-206ENST00000600289 G3BP2Q9UN86 482 aaKnown RBP15.28■□□□□ 0.04
LSM4-206ENST00000600289 C4orf51C9J302 202 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 FFAR3O14843 346 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 GPR42O15529 346 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 SMIM24O75264 130 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 HEXBP07686 556 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 SBK3P0C264 359 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 COX6A1P12074 109 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 HNRNPH1P31943 449 aaKnown RBP15.27■□□□□ 0.04
LSM4-206ENST00000600289 CCL11P51671 97 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 PGDP52209 483 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 EFNA3P52797 238 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 MYBPC3Q14896 1274 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 DEFB134Q4QY38 66 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 TOR1AIP1Q5JTV8 583 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 LIPJQ5W064 366 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 EMBQ6PCB8 327 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 PTRH1Q86Y79 214 aaKnown RBP15.27■□□□□ 0.04
LSM4-206ENST00000600289 GALNT16Q8N428 558 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 TEX9Q8N6V9 391 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 PTGR2Q8N8N7 351 aaPredicted RBP15.27■□□□□ 0.04
LSM4-206ENST00000600289 FDCSPQ8NFU4 85 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 AENQ8WTP8 325 aaKnown RBP15.27■□□□□ 0.04
LSM4-206ENST00000600289 MS4A6EQ96DS6 147 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 NUDT9Q9BW91 350 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 NPLQ9BXD5 320 aaPredicted RBP15.27■□□□□ 0.04
LSM4-206ENST00000600289 KLHL31Q9H511 634 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 GPR83Q9NYM4 423 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 C5AR2Q9P296 337 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 ADGRE2Q9UHX3 823 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 ZNF451Q9Y4E5 1061 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 ANGPTL3Q9Y5C1 460 aa15.27■□□□□ 0.04
LSM4-206ENST00000600289 SCN2AQ99250 2005 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 A0A088AWK7 358 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 K7EM74 188 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 ALOX12BO75342 701 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 PDGFAP04085 211 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 SHBGP04278 402 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 NUDT17P0C025 328 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 ZNF10P21506 573 aaPredicted RBP15.26■□□□□ 0.03
LSM4-206ENST00000600289 HSD17B3P37058 310 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 RAB8AP61006 207 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 GTF2H2Q13888 395 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 VWA5B1Q5TIE3 1220 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 GTF2H2CQ6P1K8 395 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 MED27Q6P2C8 311 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 ASB18Q6ZVZ8 466 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 NDUFAF7Q7L592 441 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 GOLGA7Q7Z5G4 137 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms