RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 UBE2R2Q712K3 238 aaPredicted RBP5.7□□□□□ -1.5
VRK3-220ENST00000600259 STRA8Q7Z7C7 330 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 C17orf64Q86WR6 236 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 CPNE9Q8IYJ1 553 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 EID3Q8N140 333 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 OR56A3Q8NH54 315 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 NT5CQ8TCD5 201 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 UTP15Q8TED0 518 aaKnown RBP5.7□□□□□ -1.5
VRK3-220ENST00000600259 EEF1AKMT1Q8WVE0 214 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 RND1Q92730 232 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 SEC16BQ96JE7 1060 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 PTCHD1Q96NR3 888 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 ZNF559Q9BR84 538 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 TRIM5Q9C035 493 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 PCBD2Q9H0N5 130 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 ATG10Q9H0Y0 220 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 DEFB127Q9H1M4 99 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 SPNS1Q9H2V7 528 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 TP63Q9H3D4 680 aaPredicted RBP5.7□□□□□ -1.5
VRK3-220ENST00000600259 GSX1Q9H4S2 264 aaPredicted RBP5.7□□□□□ -1.5
VRK3-220ENST00000600259 ZDHHC11Q9H8X9 412 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 CLK4Q9HAZ1 481 aaKnown RBP5.7□□□□□ -1.5
VRK3-220ENST00000600259 CCDC177Q9NQR7 707 aaPredicted RBP5.7□□□□□ -1.5
VRK3-220ENST00000600259 FBXO6Q9NRD1 293 aaPredicted RBP5.7□□□□□ -1.5
VRK3-220ENST00000600259 CCM2LQ9NUG4 571 aaPredicted RBP5.7□□□□□ -1.5
VRK3-220ENST00000600259 ZFATQ9P243 1243 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 L3MBTL1Q9Y468 752 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 FAM215AQ9Y5M1 114 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 HCFC1P51610 2035 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 DNAJC13O75165 2243 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 JMJD1CQ15652 2540 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 NSD1Q96L73 2696 aaPredicted RBP5.7□□□□□ -1.5
VRK3-220ENST00000600259 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.69□□□□□ -1.5
VRK3-220ENST00000600259 A0A1B0GTL3 188 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 A0A1B0GVC2 190 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 TRBC2A0A5B9 178 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 MAGEB16A2A368 324 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 FAM90A27PA6NNH2 459 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 A8MUA0 341 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 C4orf51C9J302 202 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 E5RI56 91 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 PFDN6O15212 129 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 CEP104O60308 925 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 PRMT3O60678 531 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 PDE9AO76083 593 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 GLSO94925 669 aaPredicted RBP5.69□□□□□ -1.5
VRK3-220ENST00000600259 IGHG3P01860 377 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 GLI4P10075 376 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 KLK2P20151 261 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 MAOAP21397 527 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 ADH7P40394 386 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 MAGEA3P43357 314 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 SCTRP47872 440 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 ZNF75DP51815 510 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 GPR85P60893 370 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 BASP1P80723 227 aaKnown RBP5.69□□□□□ -1.5
VRK3-220ENST00000600259 KIF5AQ12840 1032 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 FOXD4Q12950 439 aaPredicted RBP5.69□□□□□ -1.5
VRK3-220ENST00000600259 RUNX2Q13950 521 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 PHKG1Q16816 387 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 CATSPEREQ5SY80 951 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 CES4AQ5XG92 561 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 ZNF470Q6ECI4 717 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 UGT3A1Q6NUS8 523 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 ARHGAP11AQ6P4F7 1023 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 C16orf47Q6ZP98 133 aaPredicted RBP5.69□□□□□ -1.5
VRK3-220ENST00000600259 KIAA1328Q86T90 577 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 CYP4X1Q8N118 509 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 RNF10Q8N5U6 811 aaKnown RBP5.69□□□□□ -1.5
VRK3-220ENST00000600259 OTUD6BQ8N6M0 293 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 CCDC89Q8N998 374 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 ANKRD53Q8N9V6 530 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 CREB3L4Q8TEY5 395 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 NINJ1Q92982 152 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 TMEM125Q96AQ2 219 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 SNF8Q96H20 258 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 SIGLEC10Q96LC7 697 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 TTYH2Q9BSA4 534 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 DESI2Q9BSY9 194 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 AARSD1Q9BTE6 412 aaKnown RBP5.69□□□□□ -1.5
VRK3-220ENST00000600259 DEFB126Q9BYW3 111 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 TSGA10Q9BZW7 698 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 SLC6A16Q9GZN6 736 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 KLHL31Q9H511 634 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 PARVBQ9HBI1 364 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 PRDM9Q9NQV7 894 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 PNPLA3Q9NST1 481 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 FBXO5Q9UKT4 447 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 VPS9D1Q9Y2B5 631 aa5.69□□□□□ -1.5
VRK3-220ENST00000600259 A0A0G2JMM0 328 aa5.68□□□□□ -1.5
VRK3-220ENST00000600259 A0A0G2JNJ9 132 aa5.68□□□□□ -1.5
VRK3-220ENST00000600259 A0A1W2PPB8 328 aa5.68□□□□□ -1.5
VRK3-220ENST00000600259 A0A1W2PRS3 328 aa5.68□□□□□ -1.5
VRK3-220ENST00000600259 SDR42E2A6NKP2 422 aa5.68□□□□□ -1.5
VRK3-220ENST00000600259 USP27XA6NNY8 438 aa5.68□□□□□ -1.5
VRK3-220ENST00000600259 KIR3DP1A8MWS1 328 aa5.68□□□□□ -1.5
VRK3-220ENST00000600259 NPIPA2E9PIF3 369 aa5.68□□□□□ -1.5
VRK3-220ENST00000600259 NPIPA3F8WFD2 350 aa5.68□□□□□ -1.5
VRK3-220ENST00000600259 TFECO14948 347 aaPredicted RBP5.68□□□□□ -1.5
VRK3-220ENST00000600259 SLC16A5O15375 505 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms