RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 XPR1Q9UBH6 696 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 ANAPC2Q9UJX6 822 aa10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 UTP20O75691 2785 aaKnown RBP10.37□□□□□ -0.75
SHKBP1-206ENST00000595523 A0A0G2JN53 185 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 LRIT2A6NDA9 550 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 E2F3O00716 465 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 H2AFYO75367 372 aaKnown RBP10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 CLEC3AO75596 197 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 CDC123O75794 336 aaPredicted RBP10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 SHBGP04278 402 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 CELA2AP08217 269 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 COL6A2P12110 1019 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 GFAPP14136 432 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 ITGA3P26006 1051 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 GSTM2P28161 218 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 RHAGQ02094 409 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 MINDY4Q4G0A6 757 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 KLC3Q6P597 504 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 ATG14Q6ZNE5 492 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 TIFABQ6ZNK6 161 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 NDUFAF7Q7L592 441 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 PARP9Q8IXQ6 854 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 LAS2Q8IYD9 372 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 RNF175Q8N4F7 328 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 TEX9Q8N6V9 391 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 PTGR2Q8N8N7 351 aaPredicted RBP10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 TTLQ8NG68 377 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 GAL3ST3Q96A11 431 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 SEC16BQ96JE7 1060 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 IMMP1LQ96LU5 166 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 QRFPRQ96P65 431 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 OR1F2PQ96R84 312 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 WDR77Q9BQA1 342 aaPredicted RBP10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 ZNF700Q9H0M5 742 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 FETUBQ9UGM5 382 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 ZNF451Q9Y4E5 1061 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 PCDHGB7Q9Y5F8 929 aa10.36□□□□□ -0.75
SHKBP1-206ENST00000595523 NSG1A0A0A6YYJ2 146 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 IGHV3-20A0A0C4DH32 117 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 URADA6NGE7 173 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 ANKDD1BA6NHY2 528 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 FOXO6A8MYZ6 492 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 PCDH17O14917 1159 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 ERI3O43414 337 aaKnown RBP10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 SORBS2O94875 1100 aaKnown RBP10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 FHP07954 510 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 CYC1P08574 325 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 RBP1P09455 135 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 C8orf89P0DMQ9 161 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 EPB42P16452 691 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 EEF1DP29692 281 aaKnown RBP10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 STXBP1P61764 594 aaKnown RBP10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 VSNL1P62760 191 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 BTN3A2P78410 334 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 TLE1Q04724 770 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 LAPTM5Q13571 262 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 RUNX2Q13950 521 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 TSNAXIP1Q2TAA8 658 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 PAGE2BQ5JRK9 111 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 MFSD4BQ5TF39 518 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 GRHL2Q6ISB3 625 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 ABHD17CQ6PCB6 329 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 IGFL3Q6UXB1 125 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 GOLGA7Q7Z5G4 137 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 UBE3DQ7Z6J8 389 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 ANKRD37Q7Z713 158 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 ZGRF1Q86YA3 2104 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 CA13Q8N1Q1 262 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 TEX19Q8NA77 164 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 Q8NA96 180 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 OR2L5Q8NG80 312 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 ZNF473Q8WTR7 871 aaKnown RBP10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 CCT6BQ92526 530 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 PSMF1Q92530 271 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 TSLPQ969D9 159 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 TBC1D20Q96BZ9 403 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 THOC3Q96J01 351 aaKnown RBP10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 SCYL1Q96KG9 808 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 F2RL3Q96RI0 385 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 MRPL57Q9BQC6 102 aaKnown RBP10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 MS4A8Q9BY19 250 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 C5AR2Q9P296 337 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 PSMC3IPQ9P2W1 217 aaPredicted RBP10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 CSAG2Q9Y5P2 127 aa10.35□□□□□ -0.75
SHKBP1-206ENST00000595523 SPTAN1Q13813 2472 aaKnown RBP10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 ESPL1Q14674 2120 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 HECTD1Q9ULT8 2610 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 A0A1B0GTL3 188 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 A8MT66 165 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 MAGEB17A8MXT2 336 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 FAM227AF5H4B4 570 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 J3QKU1 62 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 OR7A17O14581 309 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 SEC24DO94855 1032 aaPredicted RBP10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 RPS17P08708 135 aaKnown RBP10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 PRR35P0CG20 571 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 IL10P22301 178 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 CERS1P27544 350 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 SOX11P35716 441 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 HNRNPFP52597 415 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms