RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 FBXO48Q5FWF7 155 aa16.37■□□□□ 0.21
IRF3-208ENST00000594387 TRIM40Q6P9F5 258 aa16.37■□□□□ 0.21
IRF3-208ENST00000594387 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.37■□□□□ 0.21
IRF3-208ENST00000594387 GALNT11Q8NCW6 608 aa16.37■□□□□ 0.21
IRF3-208ENST00000594387 PLPP5Q8NEB5 264 aa16.37■□□□□ 0.21
IRF3-208ENST00000594387 SRFBP1Q8NEF9 429 aaKnown RBP16.37■□□□□ 0.21
IRF3-208ENST00000594387 OR5T3Q8NGG3 340 aa16.37■□□□□ 0.21
IRF3-208ENST00000594387 BRIX1Q8TDN6 353 aaKnown RBP16.37■□□□□ 0.21
IRF3-208ENST00000594387 CREB3L4Q8TEY5 395 aa16.37■□□□□ 0.21
IRF3-208ENST00000594387 GAL3ST3Q96A11 431 aa16.37■□□□□ 0.21
IRF3-208ENST00000594387 LPAR4Q99677 370 aa16.37■□□□□ 0.21
IRF3-208ENST00000594387 RBCK1Q9BYM8 510 aa16.37■□□□□ 0.21
IRF3-208ENST00000594387 RHBGQ9H310 441 aa16.37■□□□□ 0.21
IRF3-208ENST00000594387 COPS7BQ9H9Q2 264 aaPredicted RBP16.37■□□□□ 0.21
IRF3-208ENST00000594387 IGSF5Q9NSI5 407 aa16.37■□□□□ 0.21
IRF3-208ENST00000594387 CNTRLQ7Z7A1 2325 aa16.37■□□□□ 0.21
IRF3-208ENST00000594387 MAGEB17A8MXT2 336 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 K7EPI3 171 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 ERI3O43414 337 aaKnown RBP16.36■□□□□ 0.21
IRF3-208ENST00000594387 PRMT3O60678 531 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 B4GALT2O60909 372 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 SEC24DO94855 1032 aaPredicted RBP16.36■□□□□ 0.21
IRF3-208ENST00000594387 CD97P48960 835 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 OR4D2P58180 307 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 Q0VFX4 171 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 DLG1Q12959 904 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 DOC2AQ14183 400 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 RCN2Q14257 317 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 TLR1Q15399 786 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 TBCCQ15814 346 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 ABHD17BQ5VST6 288 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 IGFL2Q6UWQ7 119 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 Q6ZS92 163 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 ANKRD37Q7Z713 158 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 SIRT6Q8N6T7 355 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 SLC44A1Q8WWI5 657 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 MAGEB10Q96LZ2 347 aaPredicted RBP16.36■□□□□ 0.21
IRF3-208ENST00000594387 PTCHD1Q96NR3 888 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 ATOH8Q96SQ7 321 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 PAFAH2Q99487 392 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 MESP1Q9BRJ9 268 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 NPLQ9BXD5 320 aaPredicted RBP16.36■□□□□ 0.21
IRF3-208ENST00000594387 FUT8Q9BYC5 575 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 REXO4Q9GZR2 422 aaKnown RBP16.36■□□□□ 0.21
IRF3-208ENST00000594387 KLHL31Q9H511 634 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 ZBTB20Q9HC78 741 aaPredicted RBP16.36■□□□□ 0.21
IRF3-208ENST00000594387 AGPAT4Q9NRZ5 378 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 ABI3Q9P2A4 366 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 NFU1Q9UMS0 254 aa16.36■□□□□ 0.21
IRF3-208ENST00000594387 MRPS33Q9Y291 106 aaKnown RBP16.36■□□□□ 0.21
IRF3-208ENST00000594387 TNPO3Q9Y5L0 923 aaKnown RBP16.36■□□□□ 0.21
IRF3-208ENST00000594387 COPG1Q9Y678 874 aaKnown RBP16.36■□□□□ 0.21
IRF3-208ENST00000594387 SMG1Q96Q15 3661 aaKnown RBP16.36■□□□□ 0.21
IRF3-208ENST00000594387 HELZ2Q9BYK8 2649 aaKnown RBP16.35■□□□□ 0.21
IRF3-208ENST00000594387 CLDN4O14493 209 aa16.35■□□□□ 0.21
IRF3-208ENST00000594387 B3GALT2O43825 422 aa16.35■□□□□ 0.21
IRF3-208ENST00000594387 RBP1P09455 135 aa16.35■□□□□ 0.21
IRF3-208ENST00000594387 RHOXF2BP0C7M4 288 aa16.35■□□□□ 0.21
IRF3-208ENST00000594387 SERPINB1P30740 379 aa16.35■□□□□ 0.21
IRF3-208ENST00000594387 KCNC1P48547 511 aa16.35■□□□□ 0.21
IRF3-208ENST00000594387 SNRPNP63162 240 aaKnown RBP16.35■□□□□ 0.21
IRF3-208ENST00000594387 IRF9Q00978 393 aa16.35■□□□□ 0.21
IRF3-208ENST00000594387 HYAL2Q12891 473 aa16.35■□□□□ 0.21
IRF3-208ENST00000594387 ELOAQ14241 798 aaKnown RBP16.35■□□□□ 0.21
IRF3-208ENST00000594387 ZNF169Q14929 603 aaPredicted RBP16.35■□□□□ 0.21
IRF3-208ENST00000594387 PFKFB4Q16877 469 aa16.35■□□□□ 0.21
IRF3-208ENST00000594387 SFT2D3Q587I9 215 aa16.35■□□□□ 0.21
IRF3-208ENST00000594387 MED27Q6P2C8 311 aa16.35■□□□□ 0.21
IRF3-208ENST00000594387 LANCL3Q6ZV70 420 aa16.35■□□□□ 0.21
IRF3-208ENST00000594387 MYLK4Q86YV6 388 aaPredicted RBP16.35■□□□□ 0.21
IRF3-208ENST00000594387 CYP4X1Q8N118 509 aa16.35■□□□□ 0.21
IRF3-208ENST00000594387 CISD2Q8N5K1 135 aaKnown RBP16.35■□□□□ 0.21
IRF3-208ENST00000594387 SUN3Q8TAQ9 357 aa16.35■□□□□ 0.21
IRF3-208ENST00000594387 ADAMTS18Q8TE60 1221 aa16.35■□□□□ 0.21
IRF3-208ENST00000594387 UBTD2Q8WUN7 234 aa16.35■□□□□ 0.21
IRF3-208ENST00000594387 WDR34Q96EX3 536 aa16.35■□□□□ 0.21
IRF3-208ENST00000594387 SCYL1Q96KG9 808 aa16.35■□□□□ 0.21
IRF3-208ENST00000594387 RHOXF2Q9BQY4 288 aa16.35■□□□□ 0.21
IRF3-208ENST00000594387 ROGDIQ9GZN7 287 aa16.35■□□□□ 0.21
IRF3-208ENST00000594387 KCNK13Q9HB14 408 aa16.35■□□□□ 0.21
IRF3-208ENST00000594387 CPSF2Q9P2I0 782 aaKnown RBP16.35■□□□□ 0.21
IRF3-208ENST00000594387 COPG2Q9UBF2 871 aa16.35■□□□□ 0.21
IRF3-208ENST00000594387 ADGRE2Q9UHX3 823 aa16.35■□□□□ 0.21
IRF3-208ENST00000594387 TMCO1Q9UM00 188 aa16.35■□□□□ 0.21
IRF3-208ENST00000594387 ESPL1Q14674 2120 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 SHANK1Q9Y566 2161 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 IGHV3-20A0A0C4DH32 117 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 EXOC1LA0A1B0GW35 172 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 LRIT2A6NDA9 550 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 A8MUI8 341 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 B3GALT4O96024 378 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 SMIM10L1P0DMW3 83 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 PCNAP12004 261 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 COL6A2P12110 1019 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 GMPRP36959 345 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 ARL1P40616 181 aaPredicted RBP16.34■□□□□ 0.21
IRF3-208ENST00000594387 PIK3CGP48736 1102 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 PLA2G16P53816 162 aa16.34■□□□□ 0.21
IRF3-208ENST00000594387 ALDH18A1P54886 795 aaKnown RBP16.34■□□□□ 0.21
IRF3-208ENST00000594387 TAS2R50P59544 299 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms