RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 RAVER1Q8IY67 606 aaKnown RBP15.85■□□□□ 0.13
LIG1-206ENST00000594067 LMNTD1Q8N9Z9 388 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 ZNF558Q96NG5 402 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 RIOK2Q9BVS4 552 aaKnown RBP15.85■□□□□ 0.13
LIG1-206ENST00000594067 EMILIN2Q9BXX0 1053 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 NEK6Q9HC98 313 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 GPATCH2Q9NW75 528 aa15.85■□□□□ 0.13
LIG1-206ENST00000594067 MN1Q10571 1320 aaPredicted RBP15.85■□□□□ 0.13
LIG1-206ENST00000594067 FADS2P1A8MWK0 482 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 M0R129 80 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 DPM1O60762 260 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 AOC2O75106 756 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 PSIP1O75475 530 aaKnown RBP15.84■□□□□ 0.13
LIG1-206ENST00000594067 SLC16A8O95907 504 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 MYCP01106 439 aaPredicted RBP15.84■□□□□ 0.13
LIG1-206ENST00000594067 HOXD10P28358 340 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 LIMK1P53667 647 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 CDH12P55289 794 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 SPIBQ01892 262 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 ZNF33BQ06732 778 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 THOC7Q6I9Y2 204 aaKnown RBP15.84■□□□□ 0.13
LIG1-206ENST00000594067 HEATR4Q86WZ0 1026 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 CHTF18Q8WVB6 975 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 PKP4Q99569 1192 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 NIPSNAP1Q9BPW8 284 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 SPATA9Q9BWV2 254 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 PLCXD1Q9NUJ7 323 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 GPR83Q9NYM4 423 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 CORO2BQ9UQ03 480 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 EXO1Q9UQ84 846 aaKnown RBP15.84■□□□□ 0.13
LIG1-206ENST00000594067 RGS13O14921 159 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 GRM6O15303 877 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 ALOX12P18054 663 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 PPIBP23284 216 aaKnown RBP15.84■□□□□ 0.13
LIG1-206ENST00000594067 IMPA1P29218 277 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 PBLDP30039 288 aaPredicted RBP15.84■□□□□ 0.13
LIG1-206ENST00000594067 S100A5P33763 92 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 TSTA3Q13630 321 aaPredicted RBP15.84■□□□□ 0.13
LIG1-206ENST00000594067 OTOP2Q7RTS6 562 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 TMEM25Q86YD3 366 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 DNAJC22Q8N4W6 341 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 IL17RDQ8NFM7 739 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 UTP15Q8TED0 518 aaKnown RBP15.84■□□□□ 0.13
LIG1-206ENST00000594067 TMEM159Q96B96 161 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 BRF2Q9HAW0 419 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 ACSL6Q9UKU0 697 aa15.84■□□□□ 0.13
LIG1-206ENST00000594067 RPLP0P05388 317 aaKnown RBP15.83■□□□□ 0.13
LIG1-206ENST00000594067 CDK1P06493 297 aa15.83■□□□□ 0.13
LIG1-206ENST00000594067 STSP08842 583 aa15.83■□□□□ 0.13
LIG1-206ENST00000594067 TIA1P31483 386 aaKnown RBP eCLIP15.83■□□□□ 0.13
LIG1-206ENST00000594067 HBA1P69905 142 aa15.83■□□□□ 0.13
LIG1-206ENST00000594067 EXOC3L2Q2M3D2 409 aa15.83■□□□□ 0.13
LIG1-206ENST00000594067 MLIPQ5VWP3 458 aa15.83■□□□□ 0.13
LIG1-206ENST00000594067 NLGN4XQ8N0W4 816 aa15.83■□□□□ 0.13
LIG1-206ENST00000594067 MYDGFQ969H8 173 aa15.83■□□□□ 0.13
LIG1-206ENST00000594067 COQ8BQ96D53 544 aa15.83■□□□□ 0.13
LIG1-206ENST00000594067 OR51E2Q9H255 320 aa15.83■□□□□ 0.13
LIG1-206ENST00000594067 ZNF282Q9UDV7 671 aaPredicted RBP15.83■□□□□ 0.13
LIG1-206ENST00000594067 CCL26Q9Y258 94 aa15.83■□□□□ 0.13
LIG1-206ENST00000594067 TRAV19A0A0A6YYK7 116 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 LOC100506127A0A0U1RQW1 187 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 PRAMEF25A6NGN4 478 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 CLCA1A8K7I4 914 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 J3KTA2 159 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 SAP18O00422 153 aaKnown RBP15.83■□□□□ 0.12
LIG1-206ENST00000594067 ADAMDEC1O15204 470 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 KMOO15229 486 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 TLL1O43897 1013 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 HSD3B1P14060 373 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 HSD3B2P26439 372 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 MVDP53602 400 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 ATN1P54259 1190 aaPredicted RBP15.83■□□□□ 0.12
LIG1-206ENST00000594067 POLR2LP62875 67 aaKnown RBP15.83■□□□□ 0.12
LIG1-206ENST00000594067 MC1RQ01726 317 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 TEAD4Q15561 434 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 POM121L1PQ3SYA9 428 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 SPATC1Q76KD6 591 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 TMPRSS11BQ86T26 416 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 LGI4Q8N135 537 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 CELF2-AS1Q8N7Q2 184 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 OR2A12Q8NGT7 310 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 NFKBIDQ8NI38 313 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 ZNF675Q8TD23 568 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 TMEM121BQ9BXQ6 578 aaPredicted RBP15.83■□□□□ 0.12
LIG1-206ENST00000594067 FKBP14Q9NWM8 211 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 ZNF226Q9NYT6 803 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 SPASTQ9UBP0 616 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 PCDHGB6Q9Y5F9 930 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 PCDHGA3Q9Y5H0 932 aa15.83■□□□□ 0.12
LIG1-206ENST00000594067 NEDD8-MDP1E9PL57 170 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 AP2A2O94973 939 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 C6orf47O95873 294 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 DNTTP04053 509 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 POU2F1P14859 743 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 PDHA2P29803 388 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 VIPR1P32241 457 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 COPZ1P61923 177 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 CYP4F2P78329 520 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 IFI44LQ53G44 452 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 CAMKMTQ7Z624 323 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms