RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 CDC123O75794 336 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-202ENST00000593764 WFS1O76024 890 aa17.42■□□□□ 0.38
SHKBP1-202ENST00000593764 SERPINA7P05543 415 aa17.42■□□□□ 0.38
SHKBP1-202ENST00000593764 FHP07954 510 aa17.42■□□□□ 0.38
SHKBP1-202ENST00000593764 INHBAP08476 426 aa17.42■□□□□ 0.38
SHKBP1-202ENST00000593764 GSTM2P28161 218 aa17.42■□□□□ 0.38
SHKBP1-202ENST00000593764 PCDH1Q08174 1060 aa17.42■□□□□ 0.38
SHKBP1-202ENST00000593764 TBCCQ15814 346 aa17.42■□□□□ 0.38
SHKBP1-202ENST00000593764 PRR30Q53SZ7 412 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-202ENST00000593764 XKR6Q5GH73 641 aa17.42■□□□□ 0.38
SHKBP1-202ENST00000593764 IRAK1BP1Q5VVH5 260 aa17.42■□□□□ 0.38
SHKBP1-202ENST00000593764 ANKRD37Q7Z713 158 aa17.42■□□□□ 0.38
SHKBP1-202ENST00000593764 DCAKDQ8WVC6 231 aa17.42■□□□□ 0.38
SHKBP1-202ENST00000593764 TM9SF4Q92544 642 aa17.42■□□□□ 0.38
SHKBP1-202ENST00000593764 TBC1D20Q96BZ9 403 aa17.42■□□□□ 0.38
SHKBP1-202ENST00000593764 MS4A6EQ96DS6 147 aa17.42■□□□□ 0.38
SHKBP1-202ENST00000593764 PTCD3Q96EY7 689 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-202ENST00000593764 SEC16BQ96JE7 1060 aa17.42■□□□□ 0.38
SHKBP1-202ENST00000593764 WDR77Q9BQA1 342 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-202ENST00000593764 RHBGQ9H310 441 aa17.42■□□□□ 0.38
SHKBP1-202ENST00000593764 CLK4Q9HAZ1 481 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-202ENST00000593764 SLAMF7Q9NQ25 335 aa17.42■□□□□ 0.38
SHKBP1-202ENST00000593764 A0A087WUV0 522 aaPredicted RBP17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 SYCE1LA8MT33 242 aa17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 POC1B-GALNT4F8VUJ3 575 aa17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 K7EPI3 171 aa17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 KLK8O60259 260 aa17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 CLEC3AO75596 197 aa17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 RHOXF2BP0C7M4 288 aa17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 ITGAMP11215 1152 aa17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 SOX11P35716 441 aa17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 SERPINB9P50453 376 aa17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 STXBP1P61764 594 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 SKP1P63208 163 aa17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 IRF8Q02556 426 aa17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 CHIT1Q13231 466 aa17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 INPP5JQ15735 1006 aaPredicted RBP17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 ADPRMQ3LIE5 342 aa17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 CRB2Q5IJ48 1285 aa17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 ISLR2Q6UXK2 745 aa17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 RIPOR1Q6ZS17 1223 aa17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 BRIX1Q8TDN6 353 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 LMF1Q96S06 567 aa17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 RHOXF2Q9BQY4 288 aa17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 TUBB6Q9BUF5 446 aa17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 EFCAB11Q9BUY7 163 aa17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 VPS11Q9H270 941 aa17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 ZNF358Q9NW07 568 aa17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 ZNF180Q9UJW8 692 aa17.41■□□□□ 0.38
SHKBP1-202ENST00000593764 FLNBO75369 2602 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 ANKDD1BA6NHY2 528 aa17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 MAGEB17A8MXT2 336 aa17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 FAM227AF5H4B4 570 aa17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 SEC24DO94855 1032 aaPredicted RBP17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 FAM153BP0C7A2 387 aa17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 ICAM2P13598 275 aa17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 GCAP28676 217 aa17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 MSH2P43246 934 aa17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 BTN3A2P78410 334 aa17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 MFAP5Q13361 173 aa17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 ABRAXAS2Q15018 415 aa17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 SETDB1Q15047 1291 aa17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 NSDHLQ15738 373 aa17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 FAM153CQ494X1 144 aa17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 LINC00696Q6ZRV3 163 aa17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 CUZD1Q86UP6 607 aa17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 PPP4R1Q8TF05 950 aa17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 CCT6BQ92526 530 aa17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 TSLPQ969D9 159 aa17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 GAL3ST3Q96A11 431 aa17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 QRFPRQ96P65 431 aa17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 TXLNGYQ9BZA5 131 aa17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 OPTCQ9UBM4 332 aa17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 C19orf25Q9UFG5 118 aaPredicted RBP17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 IKBKGQ9Y6K9 419 aa17.4■□□□□ 0.38
SHKBP1-202ENST00000593764 ASH1LQ9NR48 2969 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-202ENST00000593764 A0A0G2JN53 185 aa17.39■□□□□ 0.37
SHKBP1-202ENST00000593764 LRRC14BA6NHZ5 514 aa17.39■□□□□ 0.37
SHKBP1-202ENST00000593764 ERI3O43414 337 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-202ENST00000593764 B4GALT2O60909 372 aa17.39■□□□□ 0.37
SHKBP1-202ENST00000593764 ABHD2P08910 425 aa17.39■□□□□ 0.37
SHKBP1-202ENST00000593764 BTG2P78543 158 aa17.39■□□□□ 0.37
SHKBP1-202ENST00000593764 LAPTM5Q13571 262 aa17.39■□□□□ 0.37
SHKBP1-202ENST00000593764 RUNX2Q13950 521 aa17.39■□□□□ 0.37
SHKBP1-202ENST00000593764 NAA30Q147X3 362 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-202ENST00000593764 PFKFB4Q16877 469 aa17.39■□□□□ 0.37
SHKBP1-202ENST00000593764 TECRLQ5HYJ1 363 aa17.39■□□□□ 0.37
SHKBP1-202ENST00000593764 PLAG1Q6DJT9 500 aa17.39■□□□□ 0.37
SHKBP1-202ENST00000593764 KLC3Q6P597 504 aa17.39■□□□□ 0.37
SHKBP1-202ENST00000593764 TRMT10CQ7L0Y3 403 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-202ENST00000593764 CA13Q8N1Q1 262 aa17.39■□□□□ 0.37
SHKBP1-202ENST00000593764 SIRT6Q8N6T7 355 aa17.39■□□□□ 0.37
SHKBP1-202ENST00000593764 C19orf60Q96EN9 201 aa17.39■□□□□ 0.37
SHKBP1-202ENST00000593764 REXO4Q9GZR2 422 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-202ENST00000593764 PTGFRNQ9P2B2 879 aa17.39■□□□□ 0.37
SHKBP1-202ENST00000593764 TRIM49D1C9J1S8 452 aa17.38■□□□□ 0.37
SHKBP1-202ENST00000593764 RIPK2O43353 540 aa17.38■□□□□ 0.37
SHKBP1-202ENST00000593764 KRT38O76015 456 aa17.38■□□□□ 0.37
SHKBP1-202ENST00000593764 RNH1P13489 461 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-202ENST00000593764 GFAPP14136 432 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms