RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 VN1R5Q7Z5H4 357 aa25.67■■□□□ 1.7
SMAD4-213ENST00000591914 CPEB2Q7Z5Q1 589 aaKnown RBP25.67■■□□□ 1.7
SMAD4-213ENST00000591914 PLPP5Q8NEB5 264 aa25.67■■□□□ 1.7
SMAD4-213ENST00000591914 CPT1CQ8TCG5 803 aa25.67■■□□□ 1.7
SMAD4-213ENST00000591914 ZNF180Q9UJW8 692 aa25.67■■□□□ 1.7
SMAD4-213ENST00000591914 IKBKGQ9Y6K9 419 aa25.67■■□□□ 1.7
SMAD4-213ENST00000591914 PRRC2CQ9Y520 2896 aaKnown RBP25.67■■□□□ 1.7
SMAD4-213ENST00000591914 LRIT2A6NDA9 550 aa25.66■■□□□ 1.7
SMAD4-213ENST00000591914 K7EPI3 171 aa25.66■■□□□ 1.7
SMAD4-213ENST00000591914 ZIC2O95409 532 aaPredicted RBP25.66■■□□□ 1.7
SMAD4-213ENST00000591914 TBX6O95947 436 aaPredicted RBP25.66■■□□□ 1.7
SMAD4-213ENST00000591914 HNRNPH1P31943 449 aaKnown RBP25.66■■□□□ 1.7
SMAD4-213ENST00000591914 PCDH1Q08174 1060 aa25.66■■□□□ 1.7
SMAD4-213ENST00000591914 LAPTM5Q13571 262 aa25.66■■□□□ 1.7
SMAD4-213ENST00000591914 KLC3Q6P597 504 aa25.66■■□□□ 1.7
SMAD4-213ENST00000591914 TAOK1Q7L7X3 1001 aa25.66■■□□□ 1.7
SMAD4-213ENST00000591914 ANKRD37Q7Z713 158 aa25.66■■□□□ 1.7
SMAD4-213ENST00000591914 PPP4R1Q8TF05 950 aa25.66■■□□□ 1.7
SMAD4-213ENST00000591914 DCAKDQ8WVC6 231 aa25.66■■□□□ 1.7
SMAD4-213ENST00000591914 GAL3ST3Q96A11 431 aa25.66■■□□□ 1.7
SMAD4-213ENST00000591914 MS4A6EQ96DS6 147 aa25.66■■□□□ 1.7
SMAD4-213ENST00000591914 WDR77Q9BQA1 342 aaPredicted RBP25.66■■□□□ 1.7
SMAD4-213ENST00000591914 RHBGQ9H310 441 aa25.66■■□□□ 1.7
SMAD4-213ENST00000591914 OPTCQ9UBM4 332 aa25.66■■□□□ 1.7
SMAD4-213ENST00000591914 ANKDD1BA6NHY2 528 aa25.65■■□□□ 1.7
SMAD4-213ENST00000591914 MAGEB17A8MXT2 336 aa25.65■■□□□ 1.7
SMAD4-213ENST00000591914 KLK8O60259 260 aa25.65■■□□□ 1.7
SMAD4-213ENST00000591914 CDC123O75794 336 aaPredicted RBP25.65■■□□□ 1.7
SMAD4-213ENST00000591914 WFS1O76024 890 aa25.65■■□□□ 1.7
SMAD4-213ENST00000591914 ABHD2P08910 425 aa25.65■■□□□ 1.7
SMAD4-213ENST00000591914 RHOXF2BP0C7M4 288 aa25.65■■□□□ 1.7
SMAD4-213ENST00000591914 ICAM2P13598 275 aa25.65■■□□□ 1.7
SMAD4-213ENST00000591914 JAK1P23458 1154 aa25.65■■□□□ 1.7
SMAD4-213ENST00000591914 CNTFP26441 200 aa25.65■■□□□ 1.7
SMAD4-213ENST00000591914 SOX11P35716 441 aa25.65■■□□□ 1.7
SMAD4-213ENST00000591914 MSH2P43246 934 aa25.65■■□□□ 1.7
SMAD4-213ENST00000591914 IRF8Q02556 426 aa25.65■■□□□ 1.7
SMAD4-213ENST00000591914 CHIT1Q13231 466 aa25.65■■□□□ 1.7
SMAD4-213ENST00000591914 MFAP5Q13361 173 aa25.65■■□□□ 1.7
SMAD4-213ENST00000591914 ABRAXAS2Q15018 415 aa25.65■■□□□ 1.7
SMAD4-213ENST00000591914 SETDB1Q15047 1291 aa25.65■■□□□ 1.7
SMAD4-213ENST00000591914 INPP5JQ15735 1006 aaPredicted RBP25.65■■□□□ 1.7
SMAD4-213ENST00000591914 ADPRMQ3LIE5 342 aa25.65■■□□□ 1.7
SMAD4-213ENST00000591914 CRB2Q5IJ48 1285 aa25.65■■□□□ 1.7
SMAD4-213ENST00000591914 PAGE2BQ5JRK9 111 aa25.65■■□□□ 1.7
SMAD4-213ENST00000591914 ADNP2Q6IQ32 1131 aa25.65■■□□□ 1.7
SMAD4-213ENST00000591914 UHMK1Q8TAS1 419 aaKnown RBP25.65■■□□□ 1.7
SMAD4-213ENST00000591914 BRIX1Q8TDN6 353 aaKnown RBP25.65■■□□□ 1.7
SMAD4-213ENST00000591914 LMF1Q96S06 567 aa25.65■■□□□ 1.7
SMAD4-213ENST00000591914 RHOXF2Q9BQY4 288 aa25.65■■□□□ 1.7
SMAD4-213ENST00000591914 VPS11Q9H270 941 aa25.65■■□□□ 1.7
SMAD4-213ENST00000591914 EPS8L2Q9H6S3 715 aa25.65■■□□□ 1.7
SMAD4-213ENST00000591914 CSAG2Q9Y5P2 127 aa25.65■■□□□ 1.7
SMAD4-213ENST00000591914 FLNCQ14315 2725 aa25.64■■□□□ 1.7
SMAD4-213ENST00000591914 IGHV3-20A0A0C4DH32 117 aa25.64■■□□□ 1.7
SMAD4-213ENST00000591914 POC1B-GALNT4F8VUJ3 575 aa25.64■■□□□ 1.7
SMAD4-213ENST00000591914 KRT38O76015 456 aa25.64■■□□□ 1.7
SMAD4-213ENST00000591914 SEC24DO94855 1032 aaPredicted RBP25.64■■□□□ 1.7
SMAD4-213ENST00000591914 CELA2AP08217 269 aa25.64■■□□□ 1.7
SMAD4-213ENST00000591914 AP2B1P63010 937 aa25.64■■□□□ 1.7
SMAD4-213ENST00000591914 NAA30Q147X3 362 aaPredicted RBP25.64■■□□□ 1.7
SMAD4-213ENST00000591914 NSDHLQ15738 373 aa25.64■■□□□ 1.7
SMAD4-213ENST00000591914 PRR30Q53SZ7 412 aaPredicted RBP25.64■■□□□ 1.7
SMAD4-213ENST00000591914 TRMT10CQ7L0Y3 403 aaKnown RBP25.64■■□□□ 1.7
SMAD4-213ENST00000591914 PLD6Q8N2A8 252 aaKnown RBP25.64■■□□□ 1.7
SMAD4-213ENST00000591914 CCT6BQ92526 530 aa25.64■■□□□ 1.7
SMAD4-213ENST00000591914 ILKAPQ9H0C8 392 aaPredicted RBP25.64■■□□□ 1.7
SMAD4-213ENST00000591914 ERI3O43414 337 aaKnown RBP25.63■■□□□ 1.69
SMAD4-213ENST00000591914 RNH1P13489 461 aaKnown RBP25.63■■□□□ 1.69
SMAD4-213ENST00000591914 HPDP32754 393 aaPredicted RBP25.63■■□□□ 1.69
SMAD4-213ENST00000591914 ALDH18A1P54886 795 aaKnown RBP25.63■■□□□ 1.69
SMAD4-213ENST00000591914 BTN3A2P78410 334 aa25.63■■□□□ 1.69
SMAD4-213ENST00000591914 TECRLQ5HYJ1 363 aa25.63■■□□□ 1.69
SMAD4-213ENST00000591914 PLAG1Q6DJT9 500 aa25.63■■□□□ 1.69
SMAD4-213ENST00000591914 LINC00696Q6ZRV3 163 aa25.63■■□□□ 1.69
SMAD4-213ENST00000591914 CUZD1Q86UP6 607 aa25.63■■□□□ 1.69
SMAD4-213ENST00000591914 IQCKQ8N0W5 287 aa25.63■■□□□ 1.69
SMAD4-213ENST00000591914 EFCAB3Q8N7B9 438 aa25.63■■□□□ 1.69
SMAD4-213ENST00000591914 LRRN4CLQ8ND94 238 aa25.63■■□□□ 1.69
SMAD4-213ENST00000591914 TSLPQ969D9 159 aa25.63■■□□□ 1.69
SMAD4-213ENST00000591914 ITGAMP11215 1152 aa25.62■■□□□ 1.69
SMAD4-213ENST00000591914 GFAPP14136 432 aa25.62■■□□□ 1.69
SMAD4-213ENST00000591914 EPB42P16452 691 aa25.62■■□□□ 1.69
SMAD4-213ENST00000591914 HIST2H2ACQ16777 129 aaPredicted RBP25.62■■□□□ 1.69
SMAD4-213ENST00000591914 PFKFB4Q16877 469 aa25.62■■□□□ 1.69
SMAD4-213ENST00000591914 HIST2H2AA3Q6FI13 130 aa25.62■■□□□ 1.69
SMAD4-213ENST00000591914 ATCAYQ86WG3 371 aa25.62■■□□□ 1.69
SMAD4-213ENST00000591914 CA13Q8N1Q1 262 aa25.62■■□□□ 1.69
SMAD4-213ENST00000591914 AMER2Q8N7J2 671 aa25.62■■□□□ 1.69
SMAD4-213ENST00000591914 OR2L5Q8NG80 312 aa25.62■■□□□ 1.69
SMAD4-213ENST00000591914 FAR2Q96K12 515 aa25.62■■□□□ 1.69
SMAD4-213ENST00000591914 QRFPRQ96P65 431 aa25.62■■□□□ 1.69
SMAD4-213ENST00000591914 REXO4Q9GZR2 422 aaKnown RBP25.62■■□□□ 1.69
SMAD4-213ENST00000591914 PTGFRNQ9P2B2 879 aa25.62■■□□□ 1.69
SMAD4-213ENST00000591914 SHANK1Q9Y566 2161 aa25.62■■□□□ 1.69
SMAD4-213ENST00000591914 EXOC1LA0A1B0GW35 172 aa25.61■■□□□ 1.69
SMAD4-213ENST00000591914 B4GALT2O60909 372 aa25.61■■□□□ 1.69
SMAD4-213ENST00000591914 FAM153BP0C7A2 387 aa25.61■■□□□ 1.69
SMAD4-213ENST00000591914 FAM153CQ494X1 144 aa25.61■■□□□ 1.69
SMAD4-213ENST00000591914 SFT2D3Q587I9 215 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms