RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 MYBL2P10244 700 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 RNH1P13489 461 aaKnown RBP9.52□□□□□ -0.89
BRCA1-227ENST00000591849 MTHFD2P13995 350 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 SERPINB1P30740 379 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 MAGEA12P43365 314 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 SLCO1A2P46721 670 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 RAP1GDS1P52306 607 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 AP2B1P63010 937 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 DDX39BQ13838 428 aaKnown RBP9.52□□□□□ -0.89
BRCA1-227ENST00000591849 RCN2Q14257 317 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 NAA30Q147X3 362 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-227ENST00000591849 PCBP2Q15366 365 aaKnown RBP eCLIP9.52□□□□□ -0.892e-7■■■□□ 17.1
BRCA1-227ENST00000591849 TBCCQ15814 346 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 VWA5B1Q5TIE3 1220 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 TTC19Q6DKK2 380 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-227ENST00000591849 TRIM40Q6P9F5 258 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 CHSY3Q70JA7 882 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 PDSS2Q86YH6 399 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 TMEM151BQ8IW70 566 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 KBTBD2Q8IY47 623 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 ZADH2Q8N4Q0 377 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 ARHGEF39Q8N4T4 335 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 AFAP1L2Q8N4X5 818 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 SRFBP1Q8NEF9 429 aaKnown RBP9.52□□□□□ -0.89
BRCA1-227ENST00000591849 OR11G2Q8NGC1 345 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 OR5T3Q8NGG3 340 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 CREB3L4Q8TEY5 395 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 TM9SF4Q92544 642 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 GAL3ST3Q96A11 431 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 ISL2Q96A47 359 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 TBC1D20Q96BZ9 403 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 THOC3Q96J01 351 aaKnown RBP9.52□□□□□ -0.89
BRCA1-227ENST00000591849 MAGEB10Q96LZ2 347 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-227ENST00000591849 OR1F2PQ96R84 312 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 NUDT9Q9BW91 350 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 MFRPQ9BY79 579 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 SLC6A16Q9GZN6 736 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 VN1R1Q9GZP7 353 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 REXO4Q9GZR2 422 aaKnown RBP9.52□□□□□ -0.89
BRCA1-227ENST00000591849 IPPKQ9H8X2 491 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 ANKZF1Q9H8Y5 726 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 RIC8BQ9NVN3 520 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.52□□□□□ -0.89
BRCA1-227ENST00000591849 ADGRE2Q9UHX3 823 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 ASB1Q9Y576 335 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 V9GYY5 206 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-227ENST00000591849 ANKRD12Q6UB98 2062 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 LRIT2A6NDA9 550 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 LRRC14BA6NHZ5 514 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 STX16-NPEPL1H3BU86 382 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 K7EM74 188 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 CLDN4O14493 209 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 STX16O14662 325 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 KLK8O60259 260 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 SH3BGRLO75368 114 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 CEACAM4O75871 244 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 SIX3O95343 332 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-227ENST00000591849 TGFB1P01137 390 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 FHP07954 510 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 CYC1P08574 325 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 PYGBP11216 843 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 ICAM2P13598 275 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 GCAP28676 217 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 CASP2P42575 452 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 CSRP3P50461 194 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 CCNG1P51959 295 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 SNRPNP63162 240 aaKnown RBP9.51□□□□□ -0.89
BRCA1-227ENST00000591849 MYBPC3Q14896 1274 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 NSDHLQ15738 373 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 CPSF6Q16630 551 aaKnown RBP eCLIP9.51□□□□□ -0.89
BRCA1-227ENST00000591849 AP5B1Q2VPB7 878 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 AGAP7PQ5VUJ5 663 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 LIPJQ5W064 366 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 GRHL2Q6ISB3 625 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 METTL2BQ6P1Q9 378 aaKnown RBP9.51□□□□□ -0.89
BRCA1-227ENST00000591849 GOLGA7Q7Z5G4 137 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 MILR1Q7Z6M3 343 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 LCA5Q86VQ0 697 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 HPS6Q86YV9 775 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 CYP4X1Q8N118 509 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 OR2L5Q8NG80 312 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 ACMSDQ8TDX5 336 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 MS4A6EQ96DS6 147 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 WDR34Q96EX3 536 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 CMTM7Q96FZ5 175 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 PTCHD1Q96NR3 888 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 AGAP4Q96P64 663 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 F2RL3Q96RI0 385 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 ROGDIQ9GZN7 287 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 LHPPQ9H008 270 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 EPS8L2Q9H6S3 715 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 NOL11Q9H8H0 719 aaKnown RBP9.51□□□□□ -0.89
BRCA1-227ENST00000591849 C5AR2Q9P296 337 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 MAP10Q9P2G4 905 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 DCDC2Q9UHG0 476 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 ZNF490Q9ULM2 529 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-227ENST00000591849 MRPS33Q9Y291 106 aaKnown RBP9.51□□□□□ -0.89
BRCA1-227ENST00000591849 PCDHGA11Q9Y5H2 935 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 SPACA6W5XKT8 324 aa9.51□□□□□ -0.89
BRCA1-227ENST00000591849 HECTD1Q9ULT8 2610 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms