RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 PTGER4P35408 488 aa20.39■□□□□ 0.85
DDX39A-215ENST00000590696 SMSP52788 366 aa20.39■□□□□ 0.85
DDX39A-215ENST00000590696 HYAL2Q12891 473 aa20.39■□□□□ 0.85
DDX39A-215ENST00000590696 RBBP5Q15291 538 aaKnown RBP20.39■□□□□ 0.85
DDX39A-215ENST00000590696 PPP1R3AQ16821 1122 aa20.39■□□□□ 0.85
DDX39A-215ENST00000590696 NXPE4Q6UWF7 544 aa20.39■□□□□ 0.85
DDX39A-215ENST00000590696 SIAH3Q8IW03 269 aa20.39■□□□□ 0.85
DDX39A-215ENST00000590696 TRPV3Q8NET8 790 aa20.39■□□□□ 0.85
DDX39A-215ENST00000590696 AIF1LQ9BQI0 150 aa20.39■□□□□ 0.85
DDX39A-215ENST00000590696 SLC6A16Q9GZN6 736 aa20.39■□□□□ 0.85
DDX39A-215ENST00000590696 RHBGQ9H310 441 aa20.39■□□□□ 0.85
DDX39A-215ENST00000590696 KLHL31Q9H511 634 aa20.39■□□□□ 0.85
DDX39A-215ENST00000590696 CLK4Q9HAZ1 481 aaKnown RBP20.39■□□□□ 0.85
DDX39A-215ENST00000590696 SLC22A14Q9Y267 594 aa20.39■□□□□ 0.85
DDX39A-215ENST00000590696 SAGE2PA6NJ88 616 aa20.38■□□□□ 0.85
DDX39A-215ENST00000590696 A8MUA0 341 aa20.38■□□□□ 0.85
DDX39A-215ENST00000590696 PSMD12O00232 456 aaPredicted RBP20.38■□□□□ 0.85
DDX39A-215ENST00000590696 ZNHIT1O43257 154 aa20.38■□□□□ 0.85
DDX39A-215ENST00000590696 SLC25A12O75746 678 aa20.38■□□□□ 0.85
DDX39A-215ENST00000590696 SMIM10L1P0DMW3 83 aa20.38■□□□□ 0.85
DDX39A-215ENST00000590696 RNH1P13489 461 aaKnown RBP20.38■□□□□ 0.85
DDX39A-215ENST00000590696 AGAP20933 346 aa20.38■□□□□ 0.85
DDX39A-215ENST00000590696 SAT1P21673 171 aa20.38■□□□□ 0.85
DDX39A-215ENST00000590696 MLF1P58340 268 aa20.38■□□□□ 0.85
DDX39A-215ENST00000590696 GDF7Q7Z4P5 450 aa20.38■□□□□ 0.85
DDX39A-215ENST00000590696 TMPRSS11BQ86T26 416 aa20.38■□□□□ 0.85
DDX39A-215ENST00000590696 SMIM10Q96HG1 83 aa20.38■□□□□ 0.85
DDX39A-215ENST00000590696 WDR83Q9BRX9 315 aaKnown RBP20.38■□□□□ 0.85
DDX39A-215ENST00000590696 NECTIN3Q9NQS3 549 aa20.38■□□□□ 0.85
DDX39A-215ENST00000590696 PRDM9Q9NQV7 894 aa20.38■□□□□ 0.85
DDX39A-215ENST00000590696 MEMO1Q9Y316 297 aa20.38■□□□□ 0.85
DDX39A-215ENST00000590696 FBN2P35556 2912 aa20.37■□□□□ 0.85
DDX39A-215ENST00000590696 TCRBV16S1A1N1A0A5B0 115 aa20.37■□□□□ 0.85
DDX39A-215ENST00000590696 CDC7O00311 574 aa20.37■□□□□ 0.85
DDX39A-215ENST00000590696 NME2P1O60361 137 aa20.37■□□□□ 0.85
DDX39A-215ENST00000590696 ABOP16442 354 aa20.37■□□□□ 0.85
DDX39A-215ENST00000590696 ZNF37AP17032 561 aaPredicted RBP20.37■□□□□ 0.85
DDX39A-215ENST00000590696 NME2P22392 152 aa20.37■□□□□ 0.85
DDX39A-215ENST00000590696 CYB561P49447 251 aa20.37■□□□□ 0.85
DDX39A-215ENST00000590696 HSF1Q00613 529 aa20.37■□□□□ 0.85
DDX39A-215ENST00000590696 MORF4L2Q15014 288 aa20.37■□□□□ 0.85
DDX39A-215ENST00000590696 TOR1AIP1Q5JTV8 583 aa20.37■□□□□ 0.85
DDX39A-215ENST00000590696 STEAP4Q687X5 459 aa20.37■□□□□ 0.85
DDX39A-215ENST00000590696 ZNF227Q86WZ6 799 aa20.37■□□□□ 0.85
DDX39A-215ENST00000590696 GHDCQ8N2G8 530 aa20.37■□□□□ 0.85
DDX39A-215ENST00000590696 CPSF7Q8N684 471 aaKnown RBP20.37■□□□□ 0.85
DDX39A-215ENST00000590696 NFAM1Q8NET5 270 aaPredicted RBP20.37■□□□□ 0.85
DDX39A-215ENST00000590696 TRIM51Q9BSJ1 452 aa20.37■□□□□ 0.85
DDX39A-215ENST00000590696 TEX264Q9Y6I9 313 aa20.37■□□□□ 0.85
DDX39A-215ENST00000590696 KCNE2Q9Y6J6 123 aa20.37■□□□□ 0.85
DDX39A-215ENST00000590696 IGKV3D-11A0A0A0MRZ8 115 aa20.36■□□□□ 0.85
DDX39A-215ENST00000590696 NPEPPSL1A6NEC2 478 aa20.36■□□□□ 0.85
DDX39A-215ENST00000590696 C4orf51C9J302 202 aa20.36■□□□□ 0.85
DDX39A-215ENST00000590696 ITGA8P53708 1063 aa20.36■□□□□ 0.85
DDX39A-215ENST00000590696 CDSNQ15517 529 aa20.36■□□□□ 0.85
DDX39A-215ENST00000590696 RNFT1Q5M7Z0 435 aa20.36■□□□□ 0.85
DDX39A-215ENST00000590696 NCCRP1Q6ZVX7 275 aaPredicted RBP20.36■□□□□ 0.85
DDX39A-215ENST00000590696 CA13Q8N1Q1 262 aa20.36■□□□□ 0.85
DDX39A-215ENST00000590696 NKAPQ8N5F7 415 aaKnown RBP20.36■□□□□ 0.85
DDX39A-215ENST00000590696 CREB3L4Q8TEY5 395 aa20.36■□□□□ 0.85
DDX39A-215ENST00000590696 LRRC39Q96DD0 335 aa20.36■□□□□ 0.85
DDX39A-215ENST00000590696 PHF12Q96QT6 1004 aa20.36■□□□□ 0.85
DDX39A-215ENST00000590696 EGFL8Q99944 293 aa20.36■□□□□ 0.85
DDX39A-215ENST00000590696 DEFB126Q9BYW3 111 aa20.36■□□□□ 0.85
DDX39A-215ENST00000590696 AICDAQ9GZX7 198 aa20.36■□□□□ 0.85
DDX39A-215ENST00000590696 TRIM45Q9H8W5 580 aaPredicted RBP20.36■□□□□ 0.85
DDX39A-215ENST00000590696 GPAMQ9HCL2 828 aa20.36■□□□□ 0.85
DDX39A-215ENST00000590696 ZFATQ9P243 1243 aa20.36■□□□□ 0.85
DDX39A-215ENST00000590696 PSAT1Q9Y617 370 aa20.36■□□□□ 0.85
DDX39A-215ENST00000590696 NCOA6Q14686 2063 aaPredicted RBP20.36■□□□□ 0.85
DDX39A-215ENST00000590696 CLDN14O95500 239 aa20.35■□□□□ 0.85
DDX39A-215ENST00000590696 SERPINA6P08185 405 aa20.35■□□□□ 0.85
DDX39A-215ENST00000590696 ZNF24P17028 368 aa20.35■□□□□ 0.85
DDX39A-215ENST00000590696 TRHRP34981 398 aaPredicted RBP20.35■□□□□ 0.85
DDX39A-215ENST00000590696 HLCSP50747 726 aa20.35■□□□□ 0.85
DDX39A-215ENST00000590696 ZNF460Q14592 562 aa20.35■□□□□ 0.85
DDX39A-215ENST00000590696 ANKMY2Q8IV38 441 aa20.35■□□□□ 0.85
DDX39A-215ENST00000590696 ARMC2Q8NEN0 867 aa20.35■□□□□ 0.85
DDX39A-215ENST00000590696 AGAP11Q8TF27 550 aa20.35■□□□□ 0.85
DDX39A-215ENST00000590696 ANKRD7Q92527 254 aa20.35■□□□□ 0.85
DDX39A-215ENST00000590696 TMEM125Q96AQ2 219 aa20.35■□□□□ 0.85
DDX39A-215ENST00000590696 MTFMTQ96DP5 389 aaKnown RBP20.35■□□□□ 0.85
DDX39A-215ENST00000590696 FAM95CA0A1B0GW59 222 aa20.34■□□□□ 0.85
DDX39A-215ENST00000590696 C19orf84I3L1E1 186 aa20.34■□□□□ 0.85
DDX39A-215ENST00000590696 FCHO1O14526 889 aa20.34■□□□□ 0.85
DDX39A-215ENST00000590696 ZSCAN12O43309 604 aa20.34■□□□□ 0.85
DDX39A-215ENST00000590696 BTN3A2P78410 334 aa20.34■□□□□ 0.85
DDX39A-215ENST00000590696 CDKL1Q00532 357 aa20.34■□□□□ 0.85
DDX39A-215ENST00000590696 SYDE1Q6ZW31 735 aaPredicted RBP20.34■□□□□ 0.85
DDX39A-215ENST00000590696 ZC3HC1Q86WB0 502 aaKnown RBP20.34■□□□□ 0.85
DDX39A-215ENST00000590696 DOLPP1Q86YN1 238 aa20.34■□□□□ 0.85
DDX39A-215ENST00000590696 CHERPQ8IWX8 916 aaKnown RBP20.34■□□□□ 0.85
DDX39A-215ENST00000590696 KLHL7Q8IXQ5 586 aa20.34■□□□□ 0.85
DDX39A-215ENST00000590696 TRMT1Q9NXH9 659 aaKnown RBP20.34■□□□□ 0.85
DDX39A-215ENST00000590696 OARD1Q9Y530 152 aa20.34■□□□□ 0.85
DDX39A-215ENST00000590696 PDZD2O15018 2839 aa20.33■□□□□ 0.85
DDX39A-215ENST00000590696 H2AFYO75367 372 aaKnown RBP20.33■□□□□ 0.85
DDX39A-215ENST00000590696 C1GALT1C1LP0DN25 315 aa20.33■□□□□ 0.85
DDX39A-215ENST00000590696 TCP1P17987 556 aaKnown RBP20.33■□□□□ 0.85
DDX39A-215ENST00000590696 HNMTP50135 292 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms