RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 PPP1R3AQ16821 1122 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 MINDY4Q4G0A6 757 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 FBXO48Q5FWF7 155 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 TMEM214Q6NUQ4 689 aaKnown RBP10.93□□□□□ -0.66
RFX1-204ENST00000588885 FRA10AC1Q70Z53 315 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 NDUFAF7Q7L592 441 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 MTERF4Q7Z6M4 381 aaKnown RBP10.93□□□□□ -0.66
RFX1-204ENST00000588885 PDSS2Q86YH6 399 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 CENPLQ8N0S6 344 aaPredicted RBP10.93□□□□□ -0.66
RFX1-204ENST00000588885 CNPY4Q8N129 248 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 ABHD11Q8NFV4 315 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 OR51Q1Q8NH59 317 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 DNAJB14Q8TBM8 379 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 SLC5A11Q8WWX8 675 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 TM4SF19Q96DZ7 209 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 THAP11Q96EK4 314 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 VPS50Q96JG6 964 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 CNDP1Q96KN2 507 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 RBCK1Q9BYM8 510 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 POPDC3Q9HBV1 291 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 ANKHQ9HCJ1 492 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 SSU72Q9NP77 194 aaKnown RBP10.93□□□□□ -0.66
RFX1-204ENST00000588885 KCNK9Q9NPC2 374 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 IGSF5Q9NSI5 407 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 C14orf105Q9NVL8 296 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 ZNF358Q9NW07 568 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 SLC17A7Q9P2U7 560 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 EMCNQ9ULC0 261 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 SLC22A14Q9Y267 594 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 B3GNT3Q9Y2A9 372 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 NAALAD2Q9Y3Q0 740 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 DYRK1BQ9Y463 629 aa10.93□□□□□ -0.66
RFX1-204ENST00000588885 MAST4O15021 2626 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 ICE1Q9Y2F5 2266 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 UTP20O75691 2785 aaKnown RBP10.92□□□□□ -0.66
RFX1-204ENST00000588885 BLACEA4D250 179 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 CYSRT1A8MQ03 144 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 POLR3GO15318 223 aaPredicted RBP10.92□□□□□ -0.66
RFX1-204ENST00000588885 NDUFS4O43181 175 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 KLHL41O60662 606 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 CDC123O75794 336 aaPredicted RBP10.92□□□□□ -0.66
RFX1-204ENST00000588885 IPO13O94829 963 aaKnown RBP10.92□□□□□ -0.66
RFX1-204ENST00000588885 KLHL18O94889 574 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 NSA2O95478 260 aaKnown RBP10.92□□□□□ -0.66
RFX1-204ENST00000588885 F10P00742 488 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 COX6A1P12074 109 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 VARSP26640 1264 aaKnown RBP10.92□□□□□ -0.66
RFX1-204ENST00000588885 XCR1P46094 333 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 GYS2P54840 703 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 OLR1P78380 273 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 SRSF1Q07955 248 aaKnown RBP eCLIP10.92□□□□□ -0.66
RFX1-204ENST00000588885 FHL5Q5TD97 284 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 IGFL3Q6UXB1 125 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 CUZD1Q86UP6 607 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 HPS6Q86YV9 775 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 KBTBD2Q8IY47 623 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 SIRT6Q8N6T7 355 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 CATSPER1Q8NEC5 780 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 OR4K1Q8NGD4 311 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 OR5T3Q8NGG3 340 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 TCP10LQ8TDR4 215 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 TM9SF4Q92544 642 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 SNRNP40Q96DI7 357 aaKnown RBP10.92□□□□□ -0.66
RFX1-204ENST00000588885 MAGEB10Q96LZ2 347 aaPredicted RBP10.92□□□□□ -0.66
RFX1-204ENST00000588885 FAM111AQ96PZ2 611 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 SLC29A3Q9BZD2 475 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 TGIF2Q9GZN2 237 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 VN1R1Q9GZP7 353 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 ASF1BQ9NVP2 202 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 PLA2G3Q9NZ20 509 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 PTGFRNQ9P2B2 879 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 CNTRLQ7Z7A1 2325 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 DOCK10Q96BY6 2186 aa10.92□□□□□ -0.66
RFX1-204ENST00000588885 USP9XQ93008 2570 aaPredicted RBP10.91□□□□□ -0.66
RFX1-204ENST00000588885 IGHV1-45A0A0A0MS14 117 aa10.91□□□□□ -0.66
RFX1-204ENST00000588885 TRBC2A0A5B9 178 aa10.91□□□□□ -0.66
RFX1-204ENST00000588885 TCP11X1B4DZS4 312 aa10.91□□□□□ -0.66
RFX1-204ENST00000588885 H0YIG0 161 aa10.91□□□□□ -0.66
RFX1-204ENST00000588885 SEC24DO94855 1032 aaPredicted RBP10.91□□□□□ -0.66
RFX1-204ENST00000588885 WDR47O94967 919 aa10.91□□□□□ -0.66
RFX1-204ENST00000588885 SLC35G6P0C7Q6 338 aa10.91□□□□□ -0.66
RFX1-204ENST00000588885 PRR35P0CG20 571 aa10.91□□□□□ -0.66
RFX1-204ENST00000588885 CCDC166P0CW27 439 aa10.91□□□□□ -0.66
RFX1-204ENST00000588885 C8orf89P0DMQ9 161 aa10.91□□□□□ -0.66
RFX1-204ENST00000588885 GP1BBP13224 206 aa10.91□□□□□ -0.66
RFX1-204ENST00000588885 CHN1P15882 459 aa10.91□□□□□ -0.66
RFX1-204ENST00000588885 MRPL49Q13405 166 aaKnown RBP10.91□□□□□ -0.66
RFX1-204ENST00000588885 OR4D1Q15615 310 aa10.91□□□□□ -0.66
RFX1-204ENST00000588885 EIF2S3LQ2VIR3 472 aaKnown RBP10.91□□□□□ -0.66
RFX1-204ENST00000588885 DEFB134Q4QY38 66 aa10.91□□□□□ -0.66
RFX1-204ENST00000588885 NXPE4Q6UWF7 544 aa10.91□□□□□ -0.66
RFX1-204ENST00000588885 LANCL3Q6ZV70 420 aa10.91□□□□□ -0.66
RFX1-204ENST00000588885 TMPRSS11BQ86T26 416 aa10.91□□□□□ -0.66
RFX1-204ENST00000588885 TBC1D1Q86TI0 1168 aaPredicted RBP10.91□□□□□ -0.66
RFX1-204ENST00000588885 GPSM1Q86YR5 675 aa10.91□□□□□ -0.66
RFX1-204ENST00000588885 TBC1D19Q8N5T2 526 aa10.91□□□□□ -0.66
RFX1-204ENST00000588885 GALNT11Q8NCW6 608 aa10.91□□□□□ -0.66
RFX1-204ENST00000588885 BRIX1Q8TDN6 353 aaKnown RBP10.91□□□□□ -0.66
RFX1-204ENST00000588885 METTL21AQ8WXB1 218 aa10.91□□□□□ -0.66
RFX1-204ENST00000588885 EXT2Q93063 718 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms