RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 SGK494L7N484 410 aa18■□□□□ 0.47
CLPTM1-209ENST00000588855 TAF4O00268 1085 aa18■□□□□ 0.47
CLPTM1-209ENST00000588855 FOXE1O00358 373 aaPredicted RBP18■□□□□ 0.47
CLPTM1-209ENST00000588855 ITM2AO43736 263 aa18■□□□□ 0.47
CLPTM1-209ENST00000588855 CRCPO75575 148 aa18■□□□□ 0.47
CLPTM1-209ENST00000588855 KLHL18O94889 574 aa18■□□□□ 0.47
CLPTM1-209ENST00000588855 ETHE1O95571 254 aa18■□□□□ 0.47
CLPTM1-209ENST00000588855 KRT6AP02538 564 aa18■□□□□ 0.47
CLPTM1-209ENST00000588855 KRT6BP04259 564 aa18■□□□□ 0.47
CLPTM1-209ENST00000588855 CHN1P15882 459 aa18■□□□□ 0.47
CLPTM1-209ENST00000588855 EIF2S3P41091 472 aaKnown RBP18■□□□□ 0.47
CLPTM1-209ENST00000588855 KRT6CP48668 564 aa18■□□□□ 0.47
CLPTM1-209ENST00000588855 GALNT1Q10472 559 aaPredicted RBP18■□□□□ 0.47
CLPTM1-209ENST00000588855 HERC3Q15034 1050 aa18■□□□□ 0.47
CLPTM1-209ENST00000588855 ARHGAP40Q5TG30 622 aa18■□□□□ 0.47
CLPTM1-209ENST00000588855 KHDRBS2Q5VWX1 349 aaKnown RBP18■□□□□ 0.47
CLPTM1-209ENST00000588855 CLEC6AQ6EIG7 209 aa18■□□□□ 0.47
CLPTM1-209ENST00000588855 OR2L5Q8NG80 312 aa18■□□□□ 0.47
CLPTM1-209ENST00000588855 DCBLD2Q96PD2 775 aa18■□□□□ 0.47
CLPTM1-209ENST00000588855 ZNF395Q9H8N7 513 aaPredicted RBP18■□□□□ 0.47
CLPTM1-209ENST00000588855 EML4Q9HC35 981 aaKnown RBP18■□□□□ 0.47
CLPTM1-209ENST00000588855 ZNF304Q9HCX3 659 aa18■□□□□ 0.47
CLPTM1-209ENST00000588855 CDC14AQ9UNH5 594 aa18■□□□□ 0.47
CLPTM1-209ENST00000588855 TPRP12270 2363 aaKnown RBP17.99■□□□□ 0.47
CLPTM1-209ENST00000588855 TMEM114B3SHH9 223 aa17.99■□□□□ 0.47
CLPTM1-209ENST00000588855 SAP18O00422 153 aaKnown RBP17.99■□□□□ 0.47
CLPTM1-209ENST00000588855 TERTO14746 1132 aaKnown RBP17.99■□□□□ 0.47
CLPTM1-209ENST00000588855 GALR3O60755 368 aaPredicted RBP17.99■□□□□ 0.47
CLPTM1-209ENST00000588855 TCN2P20062 427 aa17.99■□□□□ 0.47
CLPTM1-209ENST00000588855 NR1D1P20393 614 aa17.99■□□□□ 0.47
CLPTM1-209ENST00000588855 FBLP22087 321 aaKnown RBP17.99■□□□□ 0.47
CLPTM1-209ENST00000588855 SERPINB3P29508 390 aa17.99■□□□□ 0.47
CLPTM1-209ENST00000588855 AVPR1BP47901 424 aa17.99■□□□□ 0.47
CLPTM1-209ENST00000588855 PLA2G16P53816 162 aa17.99■□□□□ 0.47
CLPTM1-209ENST00000588855 C10orf62Q5T681 223 aaPredicted RBP17.99■□□□□ 0.47
CLPTM1-209ENST00000588855 TRIM40Q6P9F5 258 aa17.99■□□□□ 0.47
CLPTM1-209ENST00000588855 AMER3Q8N944 861 aa17.99■□□□□ 0.47
CLPTM1-209ENST00000588855 AGR3Q8TD06 166 aa17.99■□□□□ 0.47
CLPTM1-209ENST00000588855 COL26A1Q96A83 441 aa17.99■□□□□ 0.47
CLPTM1-209ENST00000588855 C17orf62Q9BQA9 187 aa17.99■□□□□ 0.47
CLPTM1-209ENST00000588855 C20orf27Q9GZN8 174 aa17.99■□□□□ 0.47
CLPTM1-209ENST00000588855 MED4Q9NPJ6 270 aa17.99■□□□□ 0.47
CLPTM1-209ENST00000588855 IFT80Q9P2H3 777 aaPredicted RBP17.99■□□□□ 0.47
CLPTM1-209ENST00000588855 FIS1Q9Y3D6 152 aa17.99■□□□□ 0.47
CLPTM1-209ENST00000588855 URB1O60287 2271 aaKnown RBP17.99■□□□□ 0.47
CLPTM1-209ENST00000588855 ZZEF1O43149 2961 aa17.99■□□□□ 0.47
CLPTM1-209ENST00000588855 TMEM233B4DJY2 109 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 AZIN1O14977 448 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 KLK10O43240 276 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 RDH16O75452 317 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 ONECUT2O95948 504 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 LIFP15018 202 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 F8A1P23610 371 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 GRK2P25098 689 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 DLSTP36957 453 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 ABCE1P61221 599 aaKnown RBP17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 MAT1AQ00266 395 aaKnown RBP17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 BST1Q10588 318 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 STX3Q13277 289 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 DNASE1L3Q13609 305 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 DSG2Q14126 1118 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 SYT16Q17RD7 645 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 HSP90B2PQ58FF3 399 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 DEPDC1Q5TB30 811 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 ABHD17CQ6PCB6 329 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 CHSY3Q70JA7 882 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 UBE3DQ7Z6J8 389 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 SHISA5Q8N114 240 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 PPT2Q9UMR5 302 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 C9J4A7 227 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 H0YIG0 161 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 RTCAO00442 366 aaKnown RBP17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 CNOT3O75175 753 aaKnown RBP17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 ULK1O75385 1050 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 HSPA4LO95757 839 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 UROSP10746 265 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 PTX3P26022 381 aaPredicted RBP17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 SLC1A6P48664 564 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 FOXL2P58012 376 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 OLR1P78380 273 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 BTN3A2P78410 334 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 ABRAXAS2Q15018 415 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 NCF4Q15080 339 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 TMEM35AQ53FP2 167 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 SH2D4BQ5SQS7 431 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 MLIPQ5VWP3 458 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 KANK2Q63ZY3 851 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 SCIMPQ6UWF3 145 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 ENDOVQ8N8Q3 282 aaKnown RBP17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 KDF1Q8NAX2 398 aaPredicted RBP17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 OR5T3Q8NGG3 340 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 FAR2Q96K12 515 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 QRFPRQ96P65 431 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 DPH1Q9BZG8 443 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 GPN2Q9H9Y4 310 aaPredicted RBP17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 PSD3Q9NYI0 1048 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 HCN3Q9P1Z3 774 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 CTSFQ9UBX1 484 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 ZDHHC2Q9UIJ5 367 aa17.98■□□□□ 0.47
CLPTM1-209ENST00000588855 MAP1BP46821 2468 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms