RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 RASAL1O95294 804 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 CHRM5P08912 532 aaPredicted RBP13.55□□□□□ -0.24
LIG3-205ENST00000585941 CKMT2P17540 419 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 AK4P27144 223 aaPredicted RBP13.55□□□□□ -0.24
LIG3-205ENST00000585941 CD6P30203 668 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 TSFMP43897 325 aaKnown RBP13.55□□□□□ -0.24
LIG3-205ENST00000585941 CHN2P52757 468 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 KIR2DS3Q14952 304 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 CCDC85BQ15834 202 aaPredicted RBP13.55□□□□□ -0.24
LIG3-205ENST00000585941 ZIC1Q15915 447 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 LEXMQ3ZCV2 418 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 ZNF385BQ569K4 471 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 SLC30A9Q6PML9 568 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 ZZZ3Q8IYH5 903 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 ZNF687Q8N1G0 1237 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 CBR4Q8N4T8 237 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 FAM47BQ8NA70 645 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 FBXO30Q8TB52 745 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 FAM110BQ8TC76 370 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 CREB3L4Q8TEY5 395 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 PYURFQ96I23 114 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 SLC29A1Q99808 456 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 DPH7Q9BTV6 452 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 GSDMCQ9BYG8 508 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 SRMSQ9H3Y6 488 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 LMAN1LQ9HAT1 526 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 SLC6A20Q9NP91 592 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 TAS2R9Q9NYW1 312 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 ZNF624Q9P2J8 865 aaPredicted RBP13.55□□□□□ -0.24
LIG3-205ENST00000585941 PDP2Q9P2J9 529 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 DNAJB9Q9UBS3 223 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 ZNF639Q9UID6 485 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 OAZ3Q9UMX2 235 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 CYP8B1Q9UNU6 501 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 FANCMQ8IYD8 2048 aa13.55□□□□□ -0.24
LIG3-205ENST00000585941 TNRC18O15417 2968 aaPredicted RBP13.54□□□□□ -0.24
LIG3-205ENST00000585941 A0A1W2PRB8 838 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 FAM149AA5PLN7 773 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 LRIT2A6NDA9 550 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 ISM1B1AKI9 464 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 SOCS2O14508 198 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 LCMT2O60294 686 aaKnown RBP13.54□□□□□ -0.24
LIG3-205ENST00000585941 GUCY1B2O75343 617 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 PRKD3O94806 890 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 FKBP9O95302 570 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 KRT75O95678 551 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 SERPINA1P01009 418 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 UBTFL6P0CB48 400 aaPredicted RBP13.54□□□□□ -0.24
LIG3-205ENST00000585941 MC1RQ01726 317 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 FADDQ13158 208 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 RGNQ15493 299 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 TEAD4Q15561 434 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 PUS10Q3MIT2 529 aaKnown RBP13.54□□□□□ -0.24
LIG3-205ENST00000585941 TMEM31Q5JXX7 168 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 OR4C11Q6IEV9 310 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 ZNF425Q6IV72 752 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 DCP2Q8IU60 420 aaKnown RBP13.54□□□□□ -0.24
LIG3-205ENST00000585941 OR13H1Q8NG92 308 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 NETO1Q8TDF5 533 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 GPBAR1Q8TDU6 330 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 TM4SF18Q96CE8 201 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 SHDQ96IW2 340 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 TWSG1Q9GZX9 223 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 KLF15Q9UIH9 416 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 ERVK-11Q9UQG0 969 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 V9GYQ6 96 aa13.54□□□□□ -0.24
LIG3-205ENST00000585941 TRIOBPQ9H2D6 2365 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 FAM221BA6H8Z2 402 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 SCAMP1O15126 338 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 C6orf47O95873 294 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 DRD2P14416 443 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 SLC19A1P41440 591 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 BLKP51451 505 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 HBA1P69905 142 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 TXNL4AP83876 142 aaKnown RBP13.53□□□□□ -0.24
LIG3-205ENST00000585941 TGM3Q08188 693 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 VAC14Q08AM6 782 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 RBBP4Q09028 425 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 SLC14A1Q13336 389 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 ADPRMQ3LIE5 342 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 TRIM40Q6P9F5 258 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 UGT2A3Q6UWM9 527 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 EPHX4Q8IUS5 362 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 ADHFE1Q8IWW8 467 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 TRIM48Q8IWZ4 208 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 C10orf111Q8N326 155 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 SVOPLQ8N434 492 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 MFSD9Q8NBP5 474 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 OR4E2Q8NGC2 313 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 VPS50Q96JG6 964 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 NELL2Q99435 816 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 FAIM2Q9BWQ8 316 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 PCED1AQ9H1Q7 454 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 CHST8Q9H2A9 424 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 GPR27Q9NS67 375 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 SPHK1Q9NYA1 384 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 EHD3Q9NZN3 535 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 PLXND1Q9Y4D7 1925 aa13.53□□□□□ -0.24
LIG3-205ENST00000585941 SNRNP200O75643 2136 aaKnown RBP13.53□□□□□ -0.24
LIG3-205ENST00000585941 KIR2DS5A0A0G2JLQ3 304 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms