RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 SAGE2PA6NJ88 616 aa14.06□□□□□ -0.16
VAPA-209ENST00000585042 FCHO1O14526 889 aa14.06□□□□□ -0.16
VAPA-209ENST00000585042 DNALI1O14645 258 aaPredicted RBP14.06□□□□□ -0.16
VAPA-209ENST00000585042 MAN1A2O60476 641 aa14.06□□□□□ -0.16
VAPA-209ENST00000585042 SERPINA6P08185 405 aa14.06□□□□□ -0.16
VAPA-209ENST00000585042 RNH1P13489 461 aaKnown RBP14.06□□□□□ -0.16
VAPA-209ENST00000585042 ABOP16442 354 aa14.06□□□□□ -0.16
VAPA-209ENST00000585042 TCP1P17987 556 aaKnown RBP14.06□□□□□ -0.16
VAPA-209ENST00000585042 POU3F2P20265 443 aaPredicted RBP14.06□□□□□ -0.16
VAPA-209ENST00000585042 TPP2P29144 1249 aaPredicted RBP14.06□□□□□ -0.16
VAPA-209ENST00000585042 PPP1R7Q15435 360 aa14.06□□□□□ -0.16
VAPA-209ENST00000585042 TERF2Q15554 542 aa14.06□□□□□ -0.16
VAPA-209ENST00000585042 BBS9Q3SYG4 887 aa14.06□□□□□ -0.16
VAPA-209ENST00000585042 RBM20Q5T481 1227 aaKnown RBP14.06□□□□□ -0.16
VAPA-209ENST00000585042 TEDDM1Q5T9Z0 273 aa14.06□□□□□ -0.16
VAPA-209ENST00000585042 FAM45BPQ6NSW5 357 aa14.06□□□□□ -0.16
VAPA-209ENST00000585042 NFAM1Q8NET5 270 aaPredicted RBP14.06□□□□□ -0.16
VAPA-209ENST00000585042 FAM45AQ8TCE6 357 aa14.06□□□□□ -0.16
VAPA-209ENST00000585042 SLCO2A1Q92959 643 aa14.06□□□□□ -0.16
VAPA-209ENST00000585042 NEIL2Q969S2 332 aa14.06□□□□□ -0.16
VAPA-209ENST00000585042 CERS2Q96G23 380 aa14.06□□□□□ -0.16
VAPA-209ENST00000585042 OSBPL9Q96SU4 736 aa14.06□□□□□ -0.16
VAPA-209ENST00000585042 AIF1LQ9BQI0 150 aa14.06□□□□□ -0.16
VAPA-209ENST00000585042 TRIM8Q9BZR9 551 aa14.06□□□□□ -0.16
VAPA-209ENST00000585042 SNX12Q9UMY4 172 aa14.06□□□□□ -0.16
VAPA-209ENST00000585042 KLF13Q9Y2Y9 288 aaPredicted RBP14.06□□□□□ -0.16
VAPA-209ENST00000585042 KCNE2Q9Y6J6 123 aa14.06□□□□□ -0.16
VAPA-209ENST00000585042 DCHS2Q6V1P9 2916 aa14.06□□□□□ -0.16
VAPA-209ENST00000585042 TEP1Q99973 2627 aaKnown RBP14.05□□□□□ -0.16
VAPA-209ENST00000585042 IGKV3D-11A0A0A0MRZ8 115 aa14.05□□□□□ -0.16
VAPA-209ENST00000585042 SYNDIG1LA6NDD5 238 aa14.05□□□□□ -0.16
VAPA-209ENST00000585042 KLRC4-KLRK1H3BQV0 150 aa14.05□□□□□ -0.16
VAPA-209ENST00000585042 PSMD12O00232 456 aaPredicted RBP14.05□□□□□ -0.16
VAPA-209ENST00000585042 PRRG2O14669 202 aa14.05□□□□□ -0.16
VAPA-209ENST00000585042 B4GALT2O60909 372 aa14.05□□□□□ -0.16
VAPA-209ENST00000585042 SERPIND1P05546 499 aa14.05□□□□□ -0.16
VAPA-209ENST00000585042 ZNF888P0CJ79 500 aaPredicted RBP14.05□□□□□ -0.16
VAPA-209ENST00000585042 ZNF24P17028 368 aa14.05□□□□□ -0.16
VAPA-209ENST00000585042 CDKL1Q00532 357 aa14.05□□□□□ -0.16
VAPA-209ENST00000585042 ILF2Q12905 390 aaKnown RBP14.05□□□□□ -0.16
VAPA-209ENST00000585042 FRG1Q14331 258 aaKnown RBP14.05□□□□□ -0.16
VAPA-209ENST00000585042 CATSPEREQ5SY80 951 aa14.05□□□□□ -0.16
VAPA-209ENST00000585042 HECTD2Q5U5R9 776 aa14.05□□□□□ -0.16
VAPA-209ENST00000585042 DOLPP1Q86YN1 238 aa14.05□□□□□ -0.16
VAPA-209ENST00000585042 ZNF295-AS1Q8N0V1 137 aa14.05□□□□□ -0.16
VAPA-209ENST00000585042 LRRC39Q96DD0 335 aa14.05□□□□□ -0.16
VAPA-209ENST00000585042 C14orf79Q96F83 325 aa14.05□□□□□ -0.16
VAPA-209ENST00000585042 SEC16BQ96JE7 1060 aa14.05□□□□□ -0.16
VAPA-209ENST00000585042 RBCK1Q9BYM8 510 aa14.05□□□□□ -0.16
VAPA-209ENST00000585042 DEFB126Q9BYW3 111 aa14.05□□□□□ -0.16
VAPA-209ENST00000585042 DYRK1BQ9Y463 629 aa14.05□□□□□ -0.16
VAPA-209ENST00000585042 MMACHCQ9Y4U1 282 aa14.05□□□□□ -0.16
VAPA-209ENST00000585042 TACC2O95359 2948 aa14.05□□□□□ -0.16
VAPA-209ENST00000585042 DNAJB6O75190 326 aa14.04□□□□□ -0.16
VAPA-209ENST00000585042 GSTM2P28161 218 aa14.04□□□□□ -0.16
VAPA-209ENST00000585042 HNMTP50135 292 aa14.04□□□□□ -0.16
VAPA-209ENST00000585042 BTG2P78543 158 aa14.04□□□□□ -0.16
VAPA-209ENST00000585042 REEP5Q00765 189 aa14.04□□□□□ -0.16
VAPA-209ENST00000585042 HYAL2Q12891 473 aa14.04□□□□□ -0.16
VAPA-209ENST00000585042 ZNF468Q5VIY5 522 aaPredicted RBP14.04□□□□□ -0.16
VAPA-209ENST00000585042 NXPE4Q6UWF7 544 aa14.04□□□□□ -0.16
VAPA-209ENST00000585042 SBSNQ6UWP8 590 aa14.04□□□□□ -0.16
VAPA-209ENST00000585042 THOC6Q86W42 341 aaKnown RBP14.04□□□□□ -0.16
VAPA-209ENST00000585042 ZNF227Q86WZ6 799 aa14.04□□□□□ -0.16
VAPA-209ENST00000585042 CHERPQ8IWX8 916 aaKnown RBP14.04□□□□□ -0.16
VAPA-209ENST00000585042 CYP4X1Q8N118 509 aa14.04□□□□□ -0.16
VAPA-209ENST00000585042 PDIK1LQ8N165 341 aa14.04□□□□□ -0.16
VAPA-209ENST00000585042 KIF2BQ8N4N8 673 aa14.04□□□□□ -0.16
VAPA-209ENST00000585042 NKAPQ8N5F7 415 aaKnown RBP14.04□□□□□ -0.16
VAPA-209ENST00000585042 ANKRD53Q8N9V6 530 aa14.04□□□□□ -0.16
VAPA-209ENST00000585042 ACBD4Q8NC06 268 aa14.04□□□□□ -0.16
VAPA-209ENST00000585042 TTLQ8NG68 377 aa14.04□□□□□ -0.16
VAPA-209ENST00000585042 C16orf52Q8NHV5 167 aa14.04□□□□□ -0.16
VAPA-209ENST00000585042 AGAP11Q8TF27 550 aa14.04□□□□□ -0.16
VAPA-209ENST00000585042 DMRTA2Q96SC8 542 aa14.04□□□□□ -0.16
VAPA-209ENST00000585042 NPLQ9BXD5 320 aaPredicted RBP14.04□□□□□ -0.16
VAPA-209ENST00000585042 ENKD1Q9H0I2 346 aa14.04□□□□□ -0.16
VAPA-209ENST00000585042 TSPAN10Q9H1Z9 355 aaPredicted RBP14.04□□□□□ -0.16
VAPA-209ENST00000585042 PPANQ9NQ55 473 aaKnown RBP14.04□□□□□ -0.16
VAPA-209ENST00000585042 ZFATQ9P243 1243 aa14.04□□□□□ -0.16
VAPA-209ENST00000585042 ASIC3Q9UHC3 531 aa14.04□□□□□ -0.16
VAPA-209ENST00000585042 PYCARDQ9ULZ3 195 aa14.04□□□□□ -0.16
VAPA-209ENST00000585042 PPIEQ9UNP9 301 aaKnown RBP14.04□□□□□ -0.16
VAPA-209ENST00000585042 ASB1Q9Y576 335 aa14.04□□□□□ -0.16
VAPA-209ENST00000585042 USP27XA6NNY8 438 aa14.03□□□□□ -0.16
VAPA-209ENST00000585042 H2AFYO75367 372 aaKnown RBP14.03□□□□□ -0.16
VAPA-209ENST00000585042 GUCA1CO95843 209 aa14.03□□□□□ -0.16
VAPA-209ENST00000585042 HPDP32754 393 aaPredicted RBP14.03□□□□□ -0.16
VAPA-209ENST00000585042 CLCN2P51788 898 aa14.03□□□□□ -0.16
VAPA-209ENST00000585042 STXBP1P61764 594 aaKnown RBP14.03□□□□□ -0.16
VAPA-209ENST00000585042 OLR1P78380 273 aa14.03□□□□□ -0.16
VAPA-209ENST00000585042 PPP1R3AQ16821 1122 aa14.03□□□□□ -0.16
VAPA-209ENST00000585042 MSS51Q4VC12 460 aa14.03□□□□□ -0.16
VAPA-209ENST00000585042 RNFT1Q5M7Z0 435 aa14.03□□□□□ -0.16
VAPA-209ENST00000585042 IGDCC3Q8IVU1 814 aa14.03□□□□□ -0.16
VAPA-209ENST00000585042 B3GNT7Q8NFL0 401 aa14.03□□□□□ -0.16
VAPA-209ENST00000585042 CREB3L4Q8TEY5 395 aa14.03□□□□□ -0.16
VAPA-209ENST00000585042 NAPGQ99747 312 aaPredicted RBP14.03□□□□□ -0.16
VAPA-209ENST00000585042 TREX2Q9BQ50 279 aaPredicted RBP14.03□□□□□ -0.16
VAPA-209ENST00000585042 CAPS2Q9BXY5 557 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms