RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 IL1RL2Q9HB29 575 aa12.85□□□□□ -0.35
CSNK1D-219ENST00000581660 FAM114A2Q9NRY5 505 aa12.85□□□□□ -0.35
CSNK1D-219ENST00000581660 ZNF629Q9UEG4 869 aaPredicted RBP12.85□□□□□ -0.35
CSNK1D-219ENST00000581660 PPIEQ9UNP9 301 aaKnown RBP12.85□□□□□ -0.35
CSNK1D-219ENST00000581660 YARS2Q9Y2Z4 477 aaKnown RBP12.85□□□□□ -0.35
CSNK1D-219ENST00000581660 TRBV11-1A0A0K0K1C0 115 aa12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 SMAPO00193 183 aa12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 PSIP1O75475 530 aaKnown RBP12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 SLC16A8O95907 504 aa12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 TPM3P06753 285 aa12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 ENDOUP21128 410 aaKnown RBP12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 HRH2P25021 359 aa12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 TTPAP49638 278 aa12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 MAN2A2P49641 1150 aa12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 CLCN2P51788 898 aa12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 EIF3EP60228 445 aaKnown RBP12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 TSTA3Q13630 321 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 TRIM14Q14142 442 aa12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 TERF2Q15554 542 aa12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 MEI1Q5TIA1 1274 aa12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 MAATS1Q7Z4T9 603 aa12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 LRRC56Q8IYG6 542 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 CYP4X1Q8N118 509 aa12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 FBXW8Q8N3Y1 598 aa12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 KCT2Q8NC54 265 aa12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 B3GNT7Q8NFL0 401 aa12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 OR6P1Q8NGX9 317 aa12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 LINC01560Q8TB33 94 aa12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 ZNF480Q8WV37 535 aa12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 KRT35Q92764 455 aa12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 PKP4Q99569 1192 aa12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 FAM173AQ9BQD7 235 aa12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 TMEM184CQ9NVA4 438 aa12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 MARCH4Q9P2E8 410 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 ERVK-11Q9UQG0 969 aa12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 PCDHA3Q9Y5H8 950 aa12.84□□□□□ -0.35
CSNK1D-219ENST00000581660 ZNF860A6NHJ4 632 aa12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 A8MVJ9 347 aa12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 SLC16A5O15375 505 aa12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 CBFA2T2O43439 604 aa12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 METTL18O95568 372 aa12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 CELA3AP09093 270 aa12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 KRTAP1-1Q07627 177 aa12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 FOXO1Q12778 655 aa12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 HERC3Q15034 1050 aa12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 CCDC181Q5TID7 509 aa12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 HMBOX1Q6NT76 420 aa12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 PODNL1Q6PEZ8 512 aa12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 DARS2Q6PI48 645 aaKnown RBP12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 LDB1Q86U70 411 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 ULK2Q8IYT8 1036 aa12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 PPFIBP2Q8ND30 876 aa12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 PEX13Q92968 403 aa12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 ZNF778Q96MU6 729 aa12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 PTCHD1Q96NR3 888 aa12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 DACH2Q96NX9 599 aa12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 FAM118BQ9BPY3 351 aa12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 HPF1Q9NWY4 346 aa12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 SPRR3Q9UBC9 169 aa12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 ZNF223Q9UK11 482 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 DRG1Q9Y295 367 aaKnown RBP12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 EFR3BQ9Y2G0 817 aa12.83□□□□□ -0.36
CSNK1D-219ENST00000581660 CES2O00748 559 aa12.82□□□□□ -0.36
CSNK1D-219ENST00000581660 PJA2O43164 708 aa12.82□□□□□ -0.36
CSNK1D-219ENST00000581660 PSMD3O43242 534 aa12.82□□□□□ -0.36
CSNK1D-219ENST00000581660 GALR3O60755 368 aaPredicted RBP12.82□□□□□ -0.36
CSNK1D-219ENST00000581660 IFNA2P01563 188 aa12.82□□□□□ -0.36
CSNK1D-219ENST00000581660 CATP04040 527 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-219ENST00000581660 TIMP3P35625 211 aa12.82□□□□□ -0.36
CSNK1D-219ENST00000581660 TBX2Q13207 712 aaPredicted RBP12.82□□□□□ -0.36
CSNK1D-219ENST00000581660 POU4F3Q15319 338 aa12.82□□□□□ -0.36
CSNK1D-219ENST00000581660 P3H1Q32P28 736 aa12.82□□□□□ -0.36
CSNK1D-219ENST00000581660 LINC00523Q86TU6 105 aa12.82□□□□□ -0.36
CSNK1D-219ENST00000581660 ASPGQ86U10 573 aa12.82□□□□□ -0.36
CSNK1D-219ENST00000581660 MPP5Q8N3R9 675 aa12.82□□□□□ -0.36
CSNK1D-219ENST00000581660 FBXO15Q8NCQ5 510 aaPredicted RBP12.82□□□□□ -0.36
CSNK1D-219ENST00000581660 AARSD1Q9BTE6 412 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-219ENST00000581660 CATSPERZQ9NTU4 200 aa12.82□□□□□ -0.36
CSNK1D-219ENST00000581660 ALKBH4Q9NXW9 302 aa12.82□□□□□ -0.36
CSNK1D-219ENST00000581660 JKAMPQ9P055 326 aa12.82□□□□□ -0.36
CSNK1D-219ENST00000581660 FBXW2Q9UKT8 454 aa12.82□□□□□ -0.36
CSNK1D-219ENST00000581660 VPS9D1Q9Y2B5 631 aa12.82□□□□□ -0.36
CSNK1D-219ENST00000581660 TRGV5A0A0B4J1U4 118 aa12.81□□□□□ -0.36
CSNK1D-219ENST00000581660 ATP6AP2A0A1C7CYW4 349 aa12.81□□□□□ -0.36
CSNK1D-219ENST00000581660 MACROD2A1Z1Q3 448 aa12.81□□□□□ -0.36
CSNK1D-219ENST00000581660 CLDN4O14493 209 aa12.81□□□□□ -0.36
CSNK1D-219ENST00000581660 CHST10O43529 356 aa12.81□□□□□ -0.36
CSNK1D-219ENST00000581660 B4GALT2O60909 372 aa12.81□□□□□ -0.36
CSNK1D-219ENST00000581660 ATP6AP2O75787 350 aa12.81□□□□□ -0.36
CSNK1D-219ENST00000581660 OR6B1O95007 311 aa12.81□□□□□ -0.36
CSNK1D-219ENST00000581660 TPM1P09493 284 aa12.81□□□□□ -0.36
CSNK1D-219ENST00000581660 MAOAP21397 527 aa12.81□□□□□ -0.36
CSNK1D-219ENST00000581660 CNR1P21554 472 aa12.81□□□□□ -0.36
CSNK1D-219ENST00000581660 ADRA1DP25100 572 aa12.81□□□□□ -0.36
CSNK1D-219ENST00000581660 PTPN7P35236 360 aa12.81□□□□□ -0.36
CSNK1D-219ENST00000581660 CYLC1P35663 651 aaPredicted RBP12.81□□□□□ -0.36
CSNK1D-219ENST00000581660 GPR143P51810 404 aa12.81□□□□□ -0.36
CSNK1D-219ENST00000581660 COPS2P61201 443 aa12.81□□□□□ -0.36
CSNK1D-219ENST00000581660 PRAMEP78395 509 aa12.81□□□□□ -0.36
CSNK1D-219ENST00000581660 BTG2P78543 158 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms