RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 LAPTM5Q13571 262 aa17.61■□□□□ 0.41
PPP4R1-215ENST00000580182 GTF2H2Q13888 395 aa17.61■□□□□ 0.41
PPP4R1-215ENST00000580182 MYBPC3Q14896 1274 aa17.61■□□□□ 0.41
PPP4R1-215ENST00000580182 HIST2H2ACQ16777 129 aaPredicted RBP17.61■□□□□ 0.41
PPP4R1-215ENST00000580182 PAGE2BQ5JRK9 111 aa17.61■□□□□ 0.41
PPP4R1-215ENST00000580182 HIST2H2AA3Q6FI13 130 aa17.61■□□□□ 0.41
PPP4R1-215ENST00000580182 GTF2H2CQ6P1K8 395 aa17.61■□□□□ 0.41
PPP4R1-215ENST00000580182 RNF175Q8N4F7 328 aa17.61■□□□□ 0.41
PPP4R1-215ENST00000580182 GAL3ST3Q96A11 431 aa17.61■□□□□ 0.41
PPP4R1-215ENST00000580182 SMAD5Q99717 465 aaKnown RBP17.61■□□□□ 0.41
PPP4R1-215ENST00000580182 MRPL57Q9BQC6 102 aaKnown RBP17.61■□□□□ 0.41
PPP4R1-215ENST00000580182 MRPL46Q9H2W6 279 aaKnown RBP17.61■□□□□ 0.41
PPP4R1-215ENST00000580182 RHBGQ9H310 441 aa17.61■□□□□ 0.41
PPP4R1-215ENST00000580182 TMEM216Q9P0N5 145 aa17.61■□□□□ 0.41
PPP4R1-215ENST00000580182 ZNF462Q96JM2 2506 aa17.61■□□□□ 0.41
PPP4R1-215ENST00000580182 SPENQ96T58 3664 aaKnown RBP17.61■□□□□ 0.41
PPP4R1-215ENST00000580182 LOC102723996A0A087X1L8 192 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 IGHV1-45A0A0A0MS14 117 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 NSG1A0A0A6YYJ2 146 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 A0A1W2PPM1 405 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 SH3BGRLO75368 114 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 HPP00738 406 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 CELA2AP08217 269 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 C8orf89P0DMQ9 161 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 PCNAP12004 261 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 GSTM2P28161 218 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 SLCO1A2P46721 670 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 PLA2G16P53816 162 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 STXBP1P61764 594 aaKnown RBP17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 KLRB1Q12918 225 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 PCOLCEQ15113 449 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 NADK2Q4G0N4 442 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 GRHL2Q6ISB3 625 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 MED27Q6P2C8 311 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 RPS27LQ71UM5 84 aaKnown RBP17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 NDUFAF7Q7L592 441 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 MYLK4Q86YV6 388 aaPredicted RBP17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 LAS2Q8IYD9 372 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 CYP4X1Q8N118 509 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 CA13Q8N1Q1 262 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 TEX19Q8NA77 164 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 ZNF473Q8WTR7 871 aaKnown RBP17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.6■□□□□ 0.413e-9■■■■■ 80.2
PPP4R1-215ENST00000580182 THOC3Q96J01 351 aaKnown RBP17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 SEC16BQ96JE7 1060 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 NSUN5Q96P11 429 aaKnown RBP17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 F2RL3Q96RI0 385 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 CCDC77Q9BR77 488 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 REXO4Q9GZR2 422 aaKnown RBP17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 IPPKQ9H8X2 491 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 ZBTB20Q9HC78 741 aaPredicted RBP17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 ZNF451Q9Y4E5 1061 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 TNPO3Q9Y5L0 923 aaKnown RBP17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 SCN2AQ99250 2005 aa17.6■□□□□ 0.41
PPP4R1-215ENST00000580182 SMIM23A6NLE4 172 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 FAM227AF5H4B4 570 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 OR7A17O14581 309 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 B4GALT2O60909 372 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 SMIM24O75264 130 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 FHP07954 510 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 PYGBP11216 843 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 HSD17B3P37058 310 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 SKP1P63208 163 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 RHAGQ02094 409 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 RUNX2Q13950 521 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 ADPRMQ3LIE5 342 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 VWA5B1Q5TIE3 1220 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 NIPAL1Q6NVV3 410 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 OR7G3Q8NG95 312 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 EPS8L3Q8TE67 593 aaKnown RBP17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 METTL21AQ8WXB1 218 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 TSLPQ969D9 159 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 TBC1D20Q96BZ9 403 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 VPS50Q96JG6 964 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 FAR2Q96K12 515 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 QRFPRQ96P65 431 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 CDK15Q96Q40 435 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 OR1F2PQ96R84 312 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 MFRPQ9BY79 579 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 TRIM4Q9C037 500 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 NOL11Q9H8H0 719 aaKnown RBP17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 ACTR8Q9H981 624 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 G3BP2Q9UN86 482 aaKnown RBP17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 RNF11Q9Y3C5 154 aa17.59■□□□□ 0.41
PPP4R1-215ENST00000580182 DOCK10Q96BY6 2186 aa17.58■□□□□ 0.4
PPP4R1-215ENST00000580182 A0A1W2PQ72 361 aa17.58■□□□□ 0.4
PPP4R1-215ENST00000580182 A8MT66 165 aa17.58■□□□□ 0.4
PPP4R1-215ENST00000580182 STX16-NPEPL1H3BU86 382 aa17.58■□□□□ 0.4
PPP4R1-215ENST00000580182 STX16O14662 325 aa17.58■□□□□ 0.4
PPP4R1-215ENST00000580182 TGFB1P01137 390 aa17.58■□□□□ 0.4
PPP4R1-215ENST00000580182 CD97P48960 835 aa17.58■□□□□ 0.4
PPP4R1-215ENST00000580182 BTG2P78543 158 aa17.58■□□□□ 0.4
PPP4R1-215ENST00000580182 LIPJQ5W064 366 aa17.58■□□□□ 0.4
PPP4R1-215ENST00000580182 ABHD17CQ6PCB6 329 aa17.58■□□□□ 0.4
PPP4R1-215ENST00000580182 ATG14Q6ZNE5 492 aa17.58■□□□□ 0.4
PPP4R1-215ENST00000580182 UBE3DQ7Z6J8 389 aa17.58■□□□□ 0.4
PPP4R1-215ENST00000580182 ANKRD37Q7Z713 158 aa17.58■□□□□ 0.4
PPP4R1-215ENST00000580182 RBMXL3Q8N7X1 1067 aaKnown RBP17.58■□□□□ 0.4
PPP4R1-215ENST00000580182 OR2L5Q8NG80 312 aa17.58■□□□□ 0.4
PPP4R1-215ENST00000580182 OR52B6Q8NGF0 335 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms