RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 CREB3L4Q8TEY5 395 aa10.84□□□□□ -0.67
SSH2-208ENST00000579040 RELTQ969Z4 430 aa10.84□□□□□ -0.67
SSH2-208ENST00000579040 GAL3ST3Q96A11 431 aa10.84□□□□□ -0.67
SSH2-208ENST00000579040 GPR22Q99680 433 aa10.84□□□□□ -0.67
SSH2-208ENST00000579040 UTP23Q9BRU9 249 aaKnown RBP10.84□□□□□ -0.67
SSH2-208ENST00000579040 EHD1Q9H4M9 534 aa10.84□□□□□ -0.67
SSH2-208ENST00000579040 NT5DC2Q9H857 520 aa10.84□□□□□ -0.67
SSH2-208ENST00000579040 CNOT10Q9H9A5 744 aaKnown RBP10.84□□□□□ -0.67
SSH2-208ENST00000579040 SAYSD1Q9NPB0 183 aa10.84□□□□□ -0.67
SSH2-208ENST00000579040 SMYD2Q9NRG4 433 aa10.84□□□□□ -0.67
SSH2-208ENST00000579040 GPRC5BQ9NZH0 403 aa10.84□□□□□ -0.67
SSH2-208ENST00000579040 COPG2Q9UBF2 871 aa10.84□□□□□ -0.67
SSH2-208ENST00000579040 A0A088AWK7 358 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 IGKV3D-11A0A0A0MRZ8 115 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 TCRBV9S1A1TA0A576 114 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 TCRBV16S1A1N1A0A5B0 115 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 FAM159BA6NKW6 160 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 RAD51CO43502 376 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 B4GALT2O60909 372 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 MLYCDO95822 493 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 B3GALT4O96024 378 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 STMN1P16949 149 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 ZNF10P21506 573 aaPredicted RBP10.83□□□□□ -0.68
SSH2-208ENST00000579040 SSTR1P30872 391 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 GGT5P36269 586 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 GP5P40197 560 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 KCNK10P57789 538 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 RAB8AP61006 207 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 ATP6V0D1P61421 351 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 OLR1P78380 273 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 CAV1Q03135 178 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 ZRSR2Q15696 482 aaKnown RBP10.83□□□□□ -0.68
SSH2-208ENST00000579040 TOR1AIP1Q5JTV8 583 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 FCRLBQ6BAA4 426 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 SULT1C3Q6IMI6 304 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 GFRALQ6UXV0 394 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 TMIGD1Q6UXZ0 262 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 CAPN12Q6ZSI9 719 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 GPSM1Q86YR5 675 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.83□□□□□ -0.68
SSH2-208ENST00000579040 HORMAD2Q8N7B1 307 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 AMER2Q8N7J2 671 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 TMEM178AQ8NBL3 297 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 ELP5Q8TE02 316 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 ADAMTS18Q8TE60 1221 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 PTCHD1Q96NR3 888 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 RBBP8Q99708 897 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 NPAS2Q99743 824 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 NPLQ9BXD5 320 aaPredicted RBP10.83□□□□□ -0.68
SSH2-208ENST00000579040 DPH5Q9H2P9 285 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 PRDM9Q9NQV7 894 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 DNAJC11Q9NVH1 559 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 WWOXQ9NZC7 414 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 GRHL1Q9NZI5 618 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 MTO1Q9Y2Z2 717 aaKnown RBP10.83□□□□□ -0.68
SSH2-208ENST00000579040 UTP11Q9Y3A2 253 aaKnown RBP10.83□□□□□ -0.68
SSH2-208ENST00000579040 MMACHCQ9Y4U1 282 aa10.83□□□□□ -0.68
SSH2-208ENST00000579040 NCOA6Q14686 2063 aaPredicted RBP10.82□□□□□ -0.68
SSH2-208ENST00000579040 CTAGE15A4D2H0 777 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 SYNDIG1LA6NDD5 238 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 SAGE2PA6NJ88 616 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 GABRR3A8MPY1 467 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 CXorf49A8MYA2 514 aaPredicted RBP10.82□□□□□ -0.68
SSH2-208ENST00000579040 CLGNO14967 610 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 DNAJB6O75190 326 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 CLEC3AO75596 197 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 CCDC166P0CW27 439 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 CD46P15529 392 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 MST1P26927 711 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 DCTP40126 519 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 CD96P40200 585 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 HNF4AP41235 474 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 GDF5P43026 501 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 RBPJQ06330 500 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 SLBPQ14493 270 aaKnown RBP eCLIP10.82□□□□□ -0.68
SSH2-208ENST00000579040 TERF2Q15554 542 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 OR1C1Q15619 314 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 ZKSCAN8Q15776 578 aaPredicted RBP10.82□□□□□ -0.68
SSH2-208ENST00000579040 C18orf21Q32NC0 220 aaPredicted RBP10.82□□□□□ -0.68
SSH2-208ENST00000579040 MTFR2Q6P444 385 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 C3orf62Q6ZUJ4 267 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 CTAGE6Q86UF2 777 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 FJX1Q86VR8 437 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 RPS19BP1Q86WX3 136 aaKnown RBP10.82□□□□□ -0.68
SSH2-208ENST00000579040 SLC34A3Q8N130 599 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 CA13Q8N1Q1 262 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 ARMC10Q8N2F6 343 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 FAM98AQ8NCA5 519 aaKnown RBP10.82□□□□□ -0.68
SSH2-208ENST00000579040 SCMH1Q96GD3 660 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 FAR2Q96K12 515 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 SIGLEC12Q96PQ1 595 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 TMEM79Q9BSE2 394 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 AICDAQ9GZX7 198 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 RAB17Q9H0T7 212 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 KLHL31Q9H511 634 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 CAB39LQ9H9S4 337 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 SEC14L3Q9UDX4 400 aa10.82□□□□□ -0.68
SSH2-208ENST00000579040 ASPDHA6ND91 283 aa10.81□□□□□ -0.68
SSH2-208ENST00000579040 LRIT2A6NDA9 550 aa10.81□□□□□ -0.68
SSH2-208ENST00000579040 ANKDD1BA6NHY2 528 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms