RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 PSMB4P28070 264 aa10.17□□□□□ -0.78
GGA3-206ENST00000578773 CCKARP32238 428 aa10.17□□□□□ -0.78
GGA3-206ENST00000578773 SLCO1A2P46721 670 aa10.17□□□□□ -0.78
GGA3-206ENST00000578773 DEFA6Q01524 100 aa10.17□□□□□ -0.78
GGA3-206ENST00000578773 UBXN1Q04323 297 aa10.17□□□□□ -0.78
GGA3-206ENST00000578773 CRYZQ08257 329 aaKnown RBP10.17□□□□□ -0.78
GGA3-206ENST00000578773 ITIH4Q14624 930 aa10.17□□□□□ -0.78
GGA3-206ENST00000578773 HYAL4Q2M3T9 481 aa10.17□□□□□ -0.78
GGA3-206ENST00000578773 ICE2Q659A1 982 aa10.17□□□□□ -0.78
GGA3-206ENST00000578773 ADGRD1Q6QNK2 874 aa10.17□□□□□ -0.78
GGA3-206ENST00000578773 GK5Q6ZS86 529 aa10.17□□□□□ -0.78
GGA3-206ENST00000578773 FAM47EQ6ZV65 393 aa10.17□□□□□ -0.78
GGA3-206ENST00000578773 PLEKHM3Q6ZWE6 761 aa10.17□□□□□ -0.78
GGA3-206ENST00000578773 ZNF550Q7Z398 422 aa10.17□□□□□ -0.78
GGA3-206ENST00000578773 ADCK2Q7Z695 626 aa10.17□□□□□ -0.78
GGA3-206ENST00000578773 LACC1Q8IV20 430 aa10.17□□□□□ -0.78
GGA3-206ENST00000578773 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.17□□□□□ -0.78
GGA3-206ENST00000578773 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.17□□□□□ -0.78
GGA3-206ENST00000578773 TFB1MQ8WVM0 346 aaKnown RBP10.17□□□□□ -0.78
GGA3-206ENST00000578773 ASB15Q8WXK1 588 aa10.17□□□□□ -0.78
GGA3-206ENST00000578773 NCLNQ969V3 563 aa10.17□□□□□ -0.78
GGA3-206ENST00000578773 RAD51AP1Q96B01 352 aa10.17□□□□□ -0.78
GGA3-206ENST00000578773 ANKRD9Q96BM1 317 aaPredicted RBP10.17□□□□□ -0.78
GGA3-206ENST00000578773 PTCHD1Q96NR3 888 aa10.17□□□□□ -0.78
GGA3-206ENST00000578773 ERGIC2Q96RQ1 377 aa10.17□□□□□ -0.78
GGA3-206ENST00000578773 TRIB1Q96RU8 372 aa10.17□□□□□ -0.78
GGA3-206ENST00000578773 RASL10BQ96S79 203 aa10.17□□□□□ -0.78
GGA3-206ENST00000578773 AARSD1Q9BTE6 412 aaKnown RBP10.17□□□□□ -0.78
GGA3-206ENST00000578773 SH2B3Q9UQQ2 575 aa10.17□□□□□ -0.78
GGA3-206ENST00000578773 ATG4BQ9Y4P1 393 aa10.17□□□□□ -0.78
GGA3-206ENST00000578773 A0A096LNT2 108 aa10.16□□□□□ -0.78
GGA3-206ENST00000578773 IGKV3D-11A0A0A0MRZ8 115 aa10.16□□□□□ -0.78
GGA3-206ENST00000578773 TCRBV16S1A1N1A0A5B0 115 aa10.16□□□□□ -0.78
GGA3-206ENST00000578773 CCDC162PA2VCL2 907 aa10.16□□□□□ -0.78
GGA3-206ENST00000578773 TGFBR3LH3BV60 316 aa10.16□□□□□ -0.78
GGA3-206ENST00000578773 ADAM11O75078 769 aa10.16□□□□□ -0.78
GGA3-206ENST00000578773 NDUFS7O75251 213 aa10.16□□□□□ -0.78
GGA3-206ENST00000578773 MYO1DO94832 1006 aa10.16□□□□□ -0.78
GGA3-206ENST00000578773 CCDC172P0C7W6 258 aa10.16□□□□□ -0.78
GGA3-206ENST00000578773 ERGP11308 486 aa10.16□□□□□ -0.78
GGA3-206ENST00000578773 CRYGSP22914 178 aa10.16□□□□□ -0.78
GGA3-206ENST00000578773 AOAHP28039 575 aa10.16□□□□□ -0.78
GGA3-206ENST00000578773 RPA3P35244 121 aaPredicted RBP10.16□□□□□ -0.78
GGA3-206ENST00000578773 COILP38432 576 aaPredicted RBP10.16□□□□□ -0.78
GGA3-206ENST00000578773 CPA2P48052 419 aa10.16□□□□□ -0.78
GGA3-206ENST00000578773 FAM27E3Q08E93 113 aa10.16□□□□□ -0.78
GGA3-206ENST00000578773 RNF187Q5TA31 235 aaPredicted RBP10.16□□□□□ -0.78
GGA3-206ENST00000578773 APTXQ7Z2E3 356 aaKnown RBP10.16□□□□□ -0.78
GGA3-206ENST00000578773 LDB1Q86U70 411 aaPredicted RBP10.16□□□□□ -0.78
GGA3-206ENST00000578773 MEX3DQ86XN8 651 aaKnown RBP10.16□□□□□ -0.78
GGA3-206ENST00000578773 CCDC50Q8IVM0 306 aa10.16□□□□□ -0.78
GGA3-206ENST00000578773 FBXO15Q8NCQ5 510 aaPredicted RBP10.16□□□□□ -0.78
GGA3-206ENST00000578773 NEIL3Q8TAT5 605 aa10.16□□□□□ -0.78
GGA3-206ENST00000578773 TMEM171Q8WVE6 324 aa10.16□□□□□ -0.78
GGA3-206ENST00000578773 SLC44A1Q8WWI5 657 aa10.16□□□□□ -0.78
GGA3-206ENST00000578773 ZC3HAV1LQ96H79 300 aaKnown RBP10.16□□□□□ -0.78
GGA3-206ENST00000578773 GBA3Q9H227 469 aa10.16□□□□□ -0.78
GGA3-206ENST00000578773 SPTLC3Q9NUV7 552 aa10.16□□□□□ -0.78
GGA3-206ENST00000578773 ZNHIT6Q9NWK9 470 aaKnown RBP10.16□□□□□ -0.78
GGA3-206ENST00000578773 MBD3L3A6NE82 208 aaPredicted RBP10.15□□□□□ -0.78
GGA3-206ENST00000578773 SERINC4A6NH21 518 aa10.15□□□□□ -0.78
GGA3-206ENST00000578773 H7BY64 318 aa10.15□□□□□ -0.78
GGA3-206ENST00000578773 CHST10O43529 356 aa10.15□□□□□ -0.78
GGA3-206ENST00000578773 KRT1P04264 644 aa10.15□□□□□ -0.78
GGA3-206ENST00000578773 TMIGD3P0DMS9 266 aaPredicted RBP10.15□□□□□ -0.78
GGA3-206ENST00000578773 MSNP26038 577 aaKnown RBP10.15□□□□□ -0.78
GGA3-206ENST00000578773 CPOXP36551 454 aa10.15□□□□□ -0.78
GGA3-206ENST00000578773 CLCN2P51788 898 aa10.15□□□□□ -0.78
GGA3-206ENST00000578773 GPR143P51810 404 aa10.15□□□□□ -0.78
GGA3-206ENST00000578773 GEMP55040 296 aa10.15□□□□□ -0.78
GGA3-206ENST00000578773 PLOD1Q02809 727 aaPredicted RBP10.15□□□□□ -0.78
GGA3-206ENST00000578773 POU6F1Q14863 301 aa10.15□□□□□ -0.78
GGA3-206ENST00000578773 NSUN5P2Q63ZY6 315 aa10.15□□□□□ -0.78
GGA3-206ENST00000578773 VASNQ6EMK4 673 aa10.15□□□□□ -0.78
GGA3-206ENST00000578773 MFSD7Q6UXD7 560 aa10.15□□□□□ -0.78
GGA3-206ENST00000578773 C12orf54Q6X4T0 127 aa10.15□□□□□ -0.78
GGA3-206ENST00000578773 ZNF321PQ8N8H1 164 aa10.15□□□□□ -0.78
GGA3-206ENST00000578773 B3GNT7Q8NFL0 401 aa10.15□□□□□ -0.78
GGA3-206ENST00000578773 MBD3L2Q8NHZ7 208 aaPredicted RBP10.15□□□□□ -0.78
GGA3-206ENST00000578773 SKA2Q8WVK7 121 aaPredicted RBP10.15□□□□□ -0.78
GGA3-206ENST00000578773 TBC1D20Q96BZ9 403 aa10.15□□□□□ -0.78
GGA3-206ENST00000578773 PRAP1Q96NZ9 151 aa10.15□□□□□ -0.78
GGA3-206ENST00000578773 KCNK17Q96T54 332 aa10.15□□□□□ -0.78
GGA3-206ENST00000578773 TIMP4Q99727 224 aa10.15□□□□□ -0.78
GGA3-206ENST00000578773 PROK2Q9HC23 129 aa10.15□□□□□ -0.78
GGA3-206ENST00000578773 ANKHQ9HCJ1 492 aa10.15□□□□□ -0.78
GGA3-206ENST00000578773 YARS2Q9Y2Z4 477 aaKnown RBP10.15□□□□□ -0.78
GGA3-206ENST00000578773 C15orf38-AP3S2A0A0A6YYH1 394 aa10.14□□□□□ -0.79
GGA3-206ENST00000578773 MYOCOSA0A1B0GUC4 107 aa10.14□□□□□ -0.79
GGA3-206ENST00000578773 LCMT2O60294 686 aaKnown RBP10.14□□□□□ -0.79
GGA3-206ENST00000578773 PHF2O75151 1096 aa10.14□□□□□ -0.79
GGA3-206ENST00000578773 ZNF16P17020 682 aaPredicted RBP10.14□□□□□ -0.79
GGA3-206ENST00000578773 PRDX1Q06830 199 aaKnown RBP10.14□□□□□ -0.79
GGA3-206ENST00000578773 KLHL30Q0D2K2 578 aa10.14□□□□□ -0.79
GGA3-206ENST00000578773 DUSP8Q13202 625 aa10.14□□□□□ -0.79
GGA3-206ENST00000578773 PRAMEF20Q5VT98 475 aa10.14□□□□□ -0.79
GGA3-206ENST00000578773 DNM1P46Q6ZS02 220 aa10.14□□□□□ -0.79
GGA3-206ENST00000578773 OTOAQ7RTW8 1153 aa10.14□□□□□ -0.79
GGA3-206ENST00000578773 SLC26A11Q86WA9 606 aa10.14□□□□□ -0.79
GGA3-206ENST00000578773 GCNT2Q8N0V5 402 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms