RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 ATP6AP1LQ52LC2 224 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 C9orf50Q5SZB4 431 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 FAM46CQ5VWP2 391 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 REP15Q6BDI9 236 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 RFLNAQ6ZTI6 216 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 UBE2R2Q712K3 238 aaPredicted RBP4.69□□□□□ -1.66
IFT20-205ENST00000578009 PARS2Q7L3T8 475 aaKnown RBP4.69□□□□□ -1.66
IFT20-205ENST00000578009 ARPINQ7Z6K5 226 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 ADGRD2Q7Z7M1 963 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 DHDDSQ86SQ9 333 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 RBM23Q86U06 439 aaKnown RBP4.69□□□□□ -1.66
IFT20-205ENST00000578009 AQP12AQ8IXF9 295 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 CDYL2Q8N8U2 506 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 TERB1Q8NA31 727 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 CPEB3Q8NE35 698 aaKnown RBP4.69□□□□□ -1.66
IFT20-205ENST00000578009 CATSPER1Q8NEC5 780 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 OR4F6Q8NGB9 312 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 DNAJC9Q8WXX5 260 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 USP7Q93009 1102 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 POP5Q969H6 163 aaKnown RBP4.69□□□□□ -1.66
IFT20-205ENST00000578009 ATP6V1E2Q96A05 226 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 ELSPBP1Q96BH3 223 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 MRPL38Q96DV4 380 aaKnown RBP4.69□□□□□ -1.66
IFT20-205ENST00000578009 DTD2Q96FN9 168 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 LINC00615Q96LM1 132 aaPredicted RBP4.69□□□□□ -1.66
IFT20-205ENST00000578009 PPP1R36Q96LQ0 422 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 CCDC138Q96M89 665 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 NPAS2Q99743 824 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 EGFL8Q99944 293 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 TMEM79Q9BSE2 394 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 CCM2Q9BSQ5 444 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 SOX7Q9BT81 388 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 LRFN3Q9BTN0 628 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 RIOK2Q9BVS4 552 aaKnown RBP4.69□□□□□ -1.66
IFT20-205ENST00000578009 TEX101Q9BY14 249 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 PITHD1Q9GZP4 211 aaPredicted RBP4.69□□□□□ -1.66
IFT20-205ENST00000578009 TMEM245Q9H330 911 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 FBRSL1Q9HCM7 1045 aaKnown RBP4.69□□□□□ -1.66
IFT20-205ENST00000578009 WWOXQ9NZC7 414 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 CCDC167Q9P0B6 97 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 THAP10Q9P2Z0 257 aaPredicted RBP4.69□□□□□ -1.66
IFT20-205ENST00000578009 EPS15L1Q9UBC2 864 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 ABCD2Q9UBJ2 740 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 MSRAQ9UJ68 235 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 MCM8Q9UJA3 840 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 LEF1Q9UJU2 399 aaPredicted RBP4.69□□□□□ -1.66
IFT20-205ENST00000578009 G3BP2Q9UN86 482 aaKnown RBP4.69□□□□□ -1.66
IFT20-205ENST00000578009 PSMD13Q9UNM6 376 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 GPR34Q9UPC5 381 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 PDE10AQ9Y233 779 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 LRCH1Q9Y2L9 728 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 TMED5Q9Y3A6 229 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 FIS1Q9Y3D6 152 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 CHST2Q9Y4C5 530 aa4.69□□□□□ -1.66
IFT20-205ENST00000578009 PRRC2BQ5JSZ5 2229 aaKnown RBP4.69□□□□□ -1.66
IFT20-205ENST00000578009 KCNE1BA0A087WTH5 132 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 PRSS51A0A1B0GVH4 220 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 TCRBV3S1A0A5B6 114 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 KANSL1LA0AUZ9 987 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 PIPSLA2A3N6 862 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 NCF1BA6NI72 391 aaPredicted RBP4.68□□□□□ -1.66
IFT20-205ENST00000578009 NCF1CA8MVU1 366 aaPredicted RBP4.68□□□□□ -1.66
IFT20-205ENST00000578009 A8MX80 341 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 LOC730098B7Z3J9 87 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 GPR89AB7ZAQ6 455 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 E7ENX8 843 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 H3BNX3 289 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 MANBAO00462 879 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 KPNA3O00505 521 aaPredicted RBP4.68□□□□□ -1.66
IFT20-205ENST00000578009 ANKRD28O15084 1053 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 LSM1O15116 133 aaKnown RBP4.68□□□□□ -1.66
IFT20-205ENST00000578009 ANGPT2O15123 496 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 CFLARO15519 480 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 TSPAN6O43657 245 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 PDE5AO76074 875 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 STAMBPO95630 424 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 CATP04040 527 aaKnown RBP4.68□□□□□ -1.66
IFT20-205ENST00000578009 ELFN1P0C7U0 828 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 GPR89BP0CG08 455 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 PRPS2P11908 318 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 HSD3B1P14060 373 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 NCF1P14598 390 aaPredicted RBP4.68□□□□□ -1.66
IFT20-205ENST00000578009 CD1EP15812 388 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 HOXB6P17509 224 aaKnown RBP4.68□□□□□ -1.66
IFT20-205ENST00000578009 PSMC3P17980 439 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 XRCC1P18887 633 aaPredicted RBP4.68□□□□□ -1.66
IFT20-205ENST00000578009 EPORP19235 508 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 JAK1P23458 1154 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 HSD3B2P26439 372 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 PRDX3P30048 256 aaKnown RBP4.68□□□□□ -1.66
IFT20-205ENST00000578009 HMOX2P30519 316 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 AKT1P31749 480 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 OPRD1P41143 372 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 DPP6P42658 865 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 TNFRSF4P43489 277 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 GNPDA1P46926 289 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 ZFP36L2P47974 494 aaKnown RBP4.68□□□□□ -1.66
IFT20-205ENST00000578009 HSPA7P48741 367 aa4.68□□□□□ -1.66
IFT20-205ENST00000578009 POLR2JP52435 117 aaKnown RBP4.68□□□□□ -1.66
IFT20-205ENST00000578009 PNLIPRP1P54315 467 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms