RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 SH3PXD2BA1X283 911 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 H0Y858 1186 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 LEFTY2O00292 366 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 SLC1A7O00341 560 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 PLOD3O60568 738 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 FAM20BO75063 409 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 POP4O95707 220 aaKnown RBP5.16□□□□□ -1.58
VAPA-203ENST00000577539 FADS2O95864 444 aaKnown RBP5.16□□□□□ -1.58
VAPA-203ENST00000577539 C8GP07360 202 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 OCM2P0CE71 109 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 OCMP0CE72 109 aaPredicted RBP5.16□□□□□ -1.58
VAPA-203ENST00000577539 ATP1B2P14415 290 aaPredicted RBP5.16□□□□□ -1.58
VAPA-203ENST00000577539 RHCEP18577 417 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 HLA-FP30511 346 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 MAP2K4P45985 399 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 BMXP51813 675 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 B4GALNT1Q00973 533 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 SLC14A1Q13336 389 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 STARD3Q14849 445 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 PDCD1Q15116 288 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 CARD16Q5EG05 197 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 OR2T5Q6IEZ7 315 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 LRRC70Q7Z2Q7 622 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 GPR149Q86SP6 731 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 NPAS3Q8IXF0 933 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 SYTL1Q8IYJ3 562 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 LMNTD1Q8N9Z9 388 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 OR13F1Q8NGS4 319 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 OR2T29Q8NH02 315 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 TBC1D15Q8TC07 691 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 ADAMTS16Q8TE57 1224 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 RAB2BQ8WUD1 216 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 USP7Q93009 1102 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 REXO5Q96IC2 774 aaKnown RBP5.16□□□□□ -1.58
VAPA-203ENST00000577539 PLEKHA8Q96JA3 519 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 CEP295NLQ96MC4 621 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 CCDC115Q96NT0 180 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 MBOAT4Q96T53 435 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 FUNDC2Q9BWH2 189 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 RNF208Q9H0X6 261 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 REEP1Q9H902 201 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 AMBNQ9NP70 447 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 SPASTQ9UBP0 616 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 ZNF639Q9UID6 485 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 ABCG2Q9UNQ0 655 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 SAMD4AQ9UPU9 718 aaKnown RBP5.16□□□□□ -1.58
VAPA-203ENST00000577539 AP3M1Q9Y2T2 418 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 TRBV5-4A0A0C4DH59 114 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 TRIM64CA6NLI5 447 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 MAGEB17A8MXT2 336 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 PRR33A8MZF0 331 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 FAM220BPB1ANY3 271 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 B9A039 149 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 ZNF701M0R085 212 aaPredicted RBP5.15□□□□□ -1.58
VAPA-203ENST00000577539 SIGLEC6O43699 453 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 NDUFS2O75306 463 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 HPRP00739 348 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 OPN1SWP03999 348 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 GBAP04062 536 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 AMY2AP04746 511 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 C8AP07357 584 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 CBSLP0DN79 551 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 AMY2BP19961 511 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 AOAHP28039 575 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 CBSP35520 551 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 NNMTP40261 264 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 SPINT3P49223 89 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 PPP2R2BQ00005 443 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 ZNF284Q2VY69 593 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 DEFB115Q30KQ5 88 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 ZNF829Q3KNS6 432 aaPredicted RBP5.15□□□□□ -1.58
VAPA-203ENST00000577539 CEP68Q76N32 757 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 WFDC8Q8IUA0 241 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 SLC39A11Q8N1S5 342 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 C1orf52Q8N6N3 182 aaKnown RBP5.15□□□□□ -1.58
VAPA-203ENST00000577539 ZNF540Q8NDQ6 660 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 FIBINQ8TAL6 211 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 CHTF18Q8WVB6 975 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 ASZ1Q8WWH4 475 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 CMTM7Q96FZ5 175 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 TAAR9Q96RI9 348 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 RIOK2Q9BVS4 552 aaKnown RBP5.15□□□□□ -1.58
VAPA-203ENST00000577539 RDH14Q9HBH5 336 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 SGK2Q9HBY8 427 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 KRT84Q9NSB2 600 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 THG1LQ9NWX6 298 aaKnown RBP5.15□□□□□ -1.58
VAPA-203ENST00000577539 VNN3Q9NY84 501 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 ERVK-18Q9QC07 812 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 RAPGEFL1Q9UHV5 662 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 FNDC1Q4ZHG4 1894 aaPredicted RBP5.15□□□□□ -1.58
VAPA-203ENST00000577539 KIAA0100Q14667 2235 aaKnown RBP5.15□□□□□ -1.58
VAPA-203ENST00000577539 KPNA3O00505 521 aaPredicted RBP5.15□□□□□ -1.58
VAPA-203ENST00000577539 RETP07949 1114 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 ANXA4P09525 319 aaPredicted RBP5.15□□□□□ -1.58
VAPA-203ENST00000577539 C1SP09871 688 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 PF4V1P10720 104 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 LAMP1P11279 417 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 EPORP19235 508 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 PRPS1L1P21108 318 aa5.15□□□□□ -1.58
VAPA-203ENST00000577539 ETV3P41162 512 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms