RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 FKBP9O95302 570 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 UMODP07911 640 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 RBP1P09455 135 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 CPA3P15088 417 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 GNAZP19086 355 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 CD82P27701 267 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 ARL1P40616 181 aaPredicted RBP7.5□□□□□ -1.21
CCDC40-215ENST00000576033 DNAJB13P59910 316 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 IRF8Q02556 426 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 ABHD18Q0P651 414 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 BNIP1Q12981 228 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 STX3Q13277 289 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 GRM7Q14831 915 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 NCF4Q15080 339 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 PCBP2Q15366 365 aaKnown RBP eCLIP7.5□□□□□ -1.21
CCDC40-215ENST00000576033 NKAIN1Q4KMZ8 207 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 VWA2Q5GFL6 755 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 COLEC12Q5KU26 742 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 ZNF678Q5SXM1 525 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 GRHL2Q6ISB3 625 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 PCSK4Q6UW60 755 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 CCDC81Q6ZN84 652 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 LRRC69Q6ZNQ3 347 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 UBE3DQ7Z6J8 389 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 SYVN1Q86TM6 617 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 LAPTM4BQ86VI4 370 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 C10orf107Q8IVU9 208 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 ZC3H7AQ8IWR0 971 aaKnown RBP7.5□□□□□ -1.21
CCDC40-215ENST00000576033 OR4F6Q8NGB9 312 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 OR8K5Q8NH50 307 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 UTP15Q8TED0 518 aaKnown RBP7.5□□□□□ -1.21
CCDC40-215ENST00000576033 SLC13A3Q8WWT9 602 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 MMABQ96EY8 250 aaPredicted RBP7.5□□□□□ -1.21
CCDC40-215ENST00000576033 F2RL3Q96RI0 385 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 SPSB2Q99619 263 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 TRIM55Q9BYV6 548 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 PRORYQ9H606 182 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 IPPKQ9H8X2 491 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 OXSMQ9NWU1 459 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 IFT80Q9P2H3 777 aaPredicted RBP7.5□□□□□ -1.21
CCDC40-215ENST00000576033 NAALAD2Q9Y3Q0 740 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 SEC16AO15027 2179 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 MED13Q9UHV7 2174 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 MYOCOSA0A1B0GUC4 107 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 CDC14CA4D256 554 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 TMEM233B4DJY2 109 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 STX16-NPEPL1H3BU86 382 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 K7ENP7 123 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 ZNF195O14628 629 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 STX16O14662 325 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 MAP3K7O43318 606 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 TRIM13O60858 407 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 PRKRAO75569 313 aaKnown RBP7.49□□□□□ -1.21
CCDC40-215ENST00000576033 CDC123O75794 336 aaPredicted RBP7.49□□□□□ -1.21
CCDC40-215ENST00000576033 KLF7O75840 302 aaPredicted RBP7.49□□□□□ -1.21
CCDC40-215ENST00000576033 WFS1O76024 890 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 KLHL18O94889 574 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 OR4F21O95013 312 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 TGFB1P01137 390 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 CHRNGP07510 517 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 TROVE2P10155 538 aaKnown RBP eCLIP7.49□□□□□ -1.21
CCDC40-215ENST00000576033 EPB42P16452 691 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 FBLP22087 321 aaKnown RBP7.49□□□□□ -1.21
CCDC40-215ENST00000576033 ATP5F1P24539 256 aaPredicted RBP7.49□□□□□ -1.21
CCDC40-215ENST00000576033 CERS1P27544 350 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 OTX2P32243 289 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 HNRNPFP52597 415 aaKnown RBP7.49□□□□□ -1.21
CCDC40-215ENST00000576033 TMPRSS3P57727 454 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 RPS13P62277 151 aaKnown RBP7.49□□□□□ -1.21
CCDC40-215ENST00000576033 DCDP81605 110 aaKnown RBP7.49□□□□□ -1.21
CCDC40-215ENST00000576033 CDC20Q12834 499 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 MAP7Q14244 749 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 NKG7Q16617 165 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 CPSF6Q16630 551 aaKnown RBP eCLIP7.49□□□□□ -1.21
CCDC40-215ENST00000576033 DEFB134Q4QY38 66 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 SGO1Q5FBB7 561 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 TCTE1Q5JU00 501 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 CDKL4Q5MAI5 379 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 FAAH2Q6GMR7 532 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 MRPL14Q6P1L8 145 aaKnown RBP7.49□□□□□ -1.21
CCDC40-215ENST00000576033 TLDC1Q6P9B6 456 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 INO80CQ6PI98 192 aaPredicted RBP7.49□□□□□ -1.21
CCDC40-215ENST00000576033 SCIMPQ6UWF3 145 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 TMIGD1Q6UXZ0 262 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 ZNF793Q6ZN11 406 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 FITM2Q8N6M3 262 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 CCNYL1Q8N7R7 359 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 GBP7Q8N8V2 638 aaPredicted RBP7.49□□□□□ -1.21
CCDC40-215ENST00000576033 TMEM52Q8NDY8 209 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 OR7G3Q8NG95 312 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 RFWD2Q8NHY2 731 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 NT5CQ8TCD5 201 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 EXTL1Q92935 676 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 UCN3Q969E3 161 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 COL26A1Q96A83 441 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 C8orf44Q96CB5 159 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 WDR34Q96EX3 536 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 PTCD3Q96EY7 689 aaKnown RBP7.49□□□□□ -1.21
CCDC40-215ENST00000576033 BBC3Q96PG8 261 aaPredicted RBP7.49□□□□□ -1.21
CCDC40-215ENST00000576033 CSF3RQ99062 836 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms