RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	CNPY4	Q8N129	248 aa		13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	FAM26E	Q8N5C1	309 aa		13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	PLPP5	Q8NEB5	264 aa		13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	TRPV3	Q8NET8	790 aa		13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	NXNL1	Q96CM4	212 aa		13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	CNDP1	Q96KN2	507 aa		13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	ATOH8	Q96SQ7	321 aa		13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	NPAS2	Q99743	824 aa		13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	CCDC77	Q9BR77	488 aa		13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	TUBB6	Q9BUF5	446 aa		13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	EPB41L4B	Q9H329	900 aa		13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	ALG9	Q9H6U8	611 aa		13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	RIC8B	Q9NVN3	520 aa		13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	ANKRD12	Q6UB98	2062 aa		13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	NUP210L	Q5VU65	1888 aa		13.33	□□□□□ -0.27
EDC4-210	ENST00000575507	RELN	P78509	3460 aa		13.33	□□□□□ -0.27
EDC4-210	ENST00000575507	UQCRHL	A0A096LP55	91 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507		A0A0G2JN53	185 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	PCDH17	O14917	1159 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	MAN1A2	O60476	641 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	B4GALT2	O60909	372 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	UQCRH	P07919	91 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	SERPINA6	P08185	405 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	MTHFD2	P13995	350 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	TFEB	P19484	476 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	AGTR2	P50052	363 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	SRSF11	Q05519	484 aa	Known RBP	13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	RGS1	Q08116	209 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	RUNX2	Q13950	521 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	DOC2A	Q14183	400 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	ZNF169	Q14929	603 aa	Predicted RBP	13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	ABRAXAS2	Q15018	415 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	NSDHL	Q15738	373 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	BEND6	Q5SZJ8	279 aa	Predicted RBP	13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	FCRLB	Q6BAA4	426 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	SULT1C3	Q6IMI6	304 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	RIPOR1	Q6ZS17	1223 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	CENPL	Q8N0S6	344 aa	Predicted RBP	13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	PDPR	Q8NCN5	879 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	OR1N1	Q8NGS0	311 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	KCTD4	Q8WVF5	259 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	METTL21A	Q8WXB1	218 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	HAS2	Q92819	552 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	TBC1D20	Q96BZ9	403 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	PSMG3-AS1	Q96PY0	264 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	EPS8L2	Q9H6S3	715 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	PPCS	Q9HAB8	311 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	DNAJC11	Q9NVH1	559 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	WWOX	Q9NZC7	414 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	CD274	Q9NZQ7	290 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	COPG2	Q9UBF2	871 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	FETUB	Q9UGM5	382 aa		13.33	□□□□□ -0.28
EDC4-210	ENST00000575507	ASH1L	Q9NR48	2969 aa	Known RBP	13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	LRIT2	A6NDA9	550 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	MAGEB17	A8MXT2	336 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	UBXN8	O00124	270 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	H2AFY	O75367	372 aa	Known RBP	13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	STK16	O75716	305 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	WFS1	O76024	890 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	WISP2	O76076	250 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	WDPCP	O95876	746 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	C2	P06681	752 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	FH	P07954	510 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	NUDT17	P0C025	328 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	H2AFX	P16104	143 aa	Predicted RBP	13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	TSFM	P43897	325 aa	Known RBP	13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	TNFSF10	P50591	281 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	BTN3A2	P78410	334 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	TLR1	Q15399	786 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	UAP1	Q16222	522 aa	Predicted RBP	13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	BTBD16	Q32M84	506 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	SFT2D3	Q587I9	215 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	CDKL4	Q5MAI5	379 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	MROH9	Q5TGP6	573 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	PLAG1	Q6DJT9	500 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	H3F3C	Q6NXT2	135 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	TMIGD1	Q6UXZ0	262 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	RAPH1	Q70E73	1250 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	CA13	Q8N1Q1	262 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	TBC1D19	Q8N5T2	526 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	PRR7	Q8TB68	274 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	GRHL3	Q8TE85	626 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	EXT2	Q93063	718 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	MS4A6E	Q96DS6	147 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	QRFPR	Q96P65	431 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	OR1F2P	Q96R84	312 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	CD244	Q9BZW8	370 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	RHBG	Q9H310	441 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	NT5DC2	Q9H857	520 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	NECTIN3	Q9NQS3	549 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	STMN3	Q9NZ72	180 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	RNF112	Q9ULX5	631 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	IKBKG	Q9Y6K9	419 aa		13.32	□□□□□ -0.28
EDC4-210	ENST00000575507	EXOC1L	A0A1B0GW35	172 aa		13.31	□□□□□ -0.28
EDC4-210	ENST00000575507	BLACE	A4D250	179 aa		13.31	□□□□□ -0.28
EDC4-210	ENST00000575507	LRRC14B	A6NHZ5	514 aa		13.31	□□□□□ -0.28
EDC4-210	ENST00000575507		A8MUI8	341 aa		13.31	□□□□□ -0.28
EDC4-210	ENST00000575507	CCNT2	O60583	730 aa	Known RBP	13.31	□□□□□ -0.28
EDC4-210	ENST00000575507	CYC1	P08574	325 aa		13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms