RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 DPH7Q9BTV6 452 aa27.16■■□□□ 1.94
CTDNEP1-210ENST00000574322 LHX9Q9NQ69 397 aa27.16■■□□□ 1.94
CTDNEP1-210ENST00000574322 PRMT8Q9NR22 394 aaPredicted RBP27.16■■□□□ 1.94
CTDNEP1-210ENST00000574322 SH3BP4Q9P0V3 963 aa27.16■■□□□ 1.94
CTDNEP1-210ENST00000574322 AP1M2Q9Y6Q5 423 aa27.16■■□□□ 1.94
CTDNEP1-210ENST00000574322 OR5K4A6NMS3 321 aa27.15■■□□□ 1.94
CTDNEP1-210ENST00000574322 CLIC1O00299 241 aa27.15■■□□□ 1.94
CTDNEP1-210ENST00000574322 NDUFS4O43181 175 aa27.15■■□□□ 1.94
CTDNEP1-210ENST00000574322 EPN2O95208 641 aa27.15■■□□□ 1.94
CTDNEP1-210ENST00000574322 RPSAP08865 295 aaKnown RBP27.15■■□□□ 1.94
CTDNEP1-210ENST00000574322 FCGR1AP12314 374 aa27.15■■□□□ 1.94
CTDNEP1-210ENST00000574322 PXNP49023 591 aaPredicted RBP27.15■■□□□ 1.94
CTDNEP1-210ENST00000574322 KIR2DS3Q14952 304 aa27.15■■□□□ 1.94
CTDNEP1-210ENST00000574322 ADPRMQ3LIE5 342 aa27.15■■□□□ 1.94
CTDNEP1-210ENST00000574322 HMBOX1Q6NT76 420 aa27.15■■□□□ 1.94
CTDNEP1-210ENST00000574322 ADCK2Q7Z695 626 aa27.15■■□□□ 1.94
CTDNEP1-210ENST00000574322 PPCDCQ96CD2 204 aa27.15■■□□□ 1.94
CTDNEP1-210ENST00000574322 KLHDC7BQ96G42 594 aa27.15■■□□□ 1.94
CTDNEP1-210ENST00000574322 ZNF764Q96H86 408 aaPredicted RBP27.15■■□□□ 1.94
CTDNEP1-210ENST00000574322 BTBD9Q96Q07 612 aa27.15■■□□□ 1.94
CTDNEP1-210ENST00000574322 TPSD1Q9BZJ3 242 aa27.15■■□□□ 1.94
CTDNEP1-210ENST00000574322 SRMSQ9H3Y6 488 aa27.15■■□□□ 1.94
CTDNEP1-210ENST00000574322 DDX31Q9H8H2 851 aaKnown RBP27.15■■□□□ 1.94
CTDNEP1-210ENST00000574322 AURKCQ9UQB9 309 aa27.15■■□□□ 1.94
CTDNEP1-210ENST00000574322 CUL9Q8IWT3 2517 aa27.14■■□□□ 1.94
CTDNEP1-210ENST00000574322 C1orf226A1L170 272 aa27.14■■□□□ 1.94
CTDNEP1-210ENST00000574322 PPIBP23284 216 aaKnown RBP27.14■■□□□ 1.94
CTDNEP1-210ENST00000574322 BCL6P41182 706 aa27.14■■□□□ 1.94
CTDNEP1-210ENST00000574322 TSSK4Q6SA08 328 aa27.14■■□□□ 1.94
CTDNEP1-210ENST00000574322 ZNF621Q6ZSS3 439 aa27.14■■□□□ 1.94
CTDNEP1-210ENST00000574322 UBE3DQ7Z6J8 389 aa27.14■■□□□ 1.94
CTDNEP1-210ENST00000574322 ANKFN1Q8N957 763 aa27.14■■□□□ 1.94
CTDNEP1-210ENST00000574322 CADM4Q8NFZ8 388 aa27.14■■□□□ 1.94
CTDNEP1-210ENST00000574322 AGPAT4Q9NRZ5 378 aa27.14■■□□□ 1.94
CTDNEP1-210ENST00000574322 POT1Q9NUX5 634 aa27.14■■□□□ 1.94
CTDNEP1-210ENST00000574322 TAAR2Q9P1P5 351 aa27.14■■□□□ 1.94
CTDNEP1-210ENST00000574322 LRIT2A6NDA9 550 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 METTL12A8MUP2 240 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 H0YJX3 145 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 BTN3A3O00478 584 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 TIPRLO75663 272 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 BLKP51451 505 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 AQP4P55087 323 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 KIAA1614Q5VZ46 1190 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 NUDT13Q86X67 352 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 C10orf111Q8N326 155 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 FAM160A2Q8N612 972 aaPredicted RBP27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 FLVCR1-AS1Q8TAF5 88 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 SORBS1Q9BX66 1292 aaKnown RBP27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 PCDHGA2Q9Y5H1 932 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 KIR2DS5A0A0G2JLQ3 304 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 A0A0G2JNG1 304 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 ISM1B1AKI9 464 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 KIR2DS3K7RE56 304 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 GSTA4O15217 222 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 CPSF4O95639 269 aaKnown RBP27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 RETP07949 1114 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 ABCB1P08183 1280 aaPredicted RBP27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 IL3P08700 152 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 ENGP17813 658 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 CD27P26842 260 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 TRA2BP62995 288 aaKnown RBP27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 UBE2IP63279 158 aaKnown RBP27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 MC1RQ01726 317 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 CSTF1Q05048 431 aaKnown RBP27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 KIR2DS5Q14953 304 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 ZNF551Q7Z340 670 aaPredicted RBP27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 PLD3Q8IV08 490 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 NATD1Q8N6N6 113 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 TM4SF18Q96CE8 201 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 TCEAL2Q9H3H9 227 aaPredicted RBP27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 ZNF282Q9UDV7 671 aaPredicted RBP27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 CORO2BQ9UQ03 480 aa27.13■■□□□ 1.93
CTDNEP1-210ENST00000574322 FAM221BA6H8Z2 402 aa27.12■■□□□ 1.93
CTDNEP1-210ENST00000574322 DLL1O00548 723 aa27.12■■□□□ 1.93
CTDNEP1-210ENST00000574322 CXCR6O00574 342 aa27.12■■□□□ 1.93
CTDNEP1-210ENST00000574322 HAT1O14929 419 aa27.12■■□□□ 1.93
CTDNEP1-210ENST00000574322 MAPK12P53778 367 aa27.12■■□□□ 1.93
CTDNEP1-210ENST00000574322 KLC1Q07866 573 aa27.12■■□□□ 1.93
CTDNEP1-210ENST00000574322 TCEA2Q15560 299 aa27.12■■□□□ 1.93
CTDNEP1-210ENST00000574322 PRRT3Q5FWE3 981 aa27.12■■□□□ 1.93
CTDNEP1-210ENST00000574322 PARGQ86W56 976 aa27.12■■□□□ 1.93
CTDNEP1-210ENST00000574322 PAQR7Q86WK9 346 aa27.12■■□□□ 1.93
CTDNEP1-210ENST00000574322 MAML2Q8IZL2 1156 aaPredicted RBP27.12■■□□□ 1.93
CTDNEP1-210ENST00000574322 MFSD9Q8NBP5 474 aa27.12■■□□□ 1.93
CTDNEP1-210ENST00000574322 ICA1LQ8NDH6 482 aa27.12■■□□□ 1.93
CTDNEP1-210ENST00000574322 FAM110BQ8TC76 370 aa27.12■■□□□ 1.93
CTDNEP1-210ENST00000574322 TBCDQ9BTW9 1192 aa27.12■■□□□ 1.93
CTDNEP1-210ENST00000574322 SPATA9Q9BWV2 254 aa27.12■■□□□ 1.93
CTDNEP1-210ENST00000574322 VPS4AQ9UN37 437 aa27.12■■□□□ 1.93
CTDNEP1-210ENST00000574322 PCDHGA4Q9Y5G9 962 aa27.12■■□□□ 1.93
CTDNEP1-210ENST00000574322 DDCP20711 480 aa27.11■■□□□ 1.93
CTDNEP1-210ENST00000574322 FASP25445 335 aa27.11■■□□□ 1.93
CTDNEP1-210ENST00000574322 SOX11P35716 441 aa27.11■■□□□ 1.93
CTDNEP1-210ENST00000574322 SLC14A1Q13336 389 aa27.11■■□□□ 1.93
CTDNEP1-210ENST00000574322 MPEG1Q2M385 716 aa27.11■■□□□ 1.93
CTDNEP1-210ENST00000574322 FAM20CQ8IXL6 584 aa27.11■■□□□ 1.93
CTDNEP1-210ENST00000574322 MFSD2AQ8NA29 543 aa27.11■■□□□ 1.93
CTDNEP1-210ENST00000574322 JPH3Q8WXH2 748 aaPredicted RBP27.11■■□□□ 1.93
CTDNEP1-210ENST00000574322 PPWD1Q96BP3 646 aaKnown RBP27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms