RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 OR7G3Q8NG95 312 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 OR52B6Q8NGF0 335 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 OR2Y1Q8NGV0 311 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 ZCCHC10Q8TBK6 192 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 TRPC4APQ8TEL6 797 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 CREB3L4Q8TEY5 395 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 MMABQ96EY8 250 aaPredicted RBP12.84□□□□□ -0.35
RPAIN-213ENST00000573577 NSUN5Q96P11 429 aaKnown RBP12.84□□□□□ -0.35
RPAIN-213ENST00000573577 ZNF382Q96SR6 550 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 MACROD1Q9BQ69 325 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 CENPKQ9BS16 269 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 SLC6A16Q9GZN6 736 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 VIPAS39Q9H9C1 493 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 ZBTB26Q9HCK0 441 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 NXT1Q9UKK6 140 aaKnown RBP12.84□□□□□ -0.35
RPAIN-213ENST00000573577 ZNF490Q9ULM2 529 aaPredicted RBP12.84□□□□□ -0.35
RPAIN-213ENST00000573577 PTRH2Q9Y3E5 179 aaKnown RBP12.84□□□□□ -0.35
RPAIN-213ENST00000573577 MAP4K5Q9Y4K4 846 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 MAU2Q9Y6X3 613 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 BOD1L1Q8NFC6 3051 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 CFAP46Q8IYW2 2715 aa12.83□□□□□ -0.35
RPAIN-213ENST00000573577 A0A0A6YYC8 382 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-213ENST00000573577 I3L1I5 382 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-213ENST00000573577 FOXS1O43638 330 aa12.83□□□□□ -0.36
RPAIN-213ENST00000573577 TRIM13O60858 407 aa12.83□□□□□ -0.36
RPAIN-213ENST00000573577 OR1D4P47884 311 aa12.83□□□□□ -0.36
RPAIN-213ENST00000573577 LCP2Q13094 533 aa12.83□□□□□ -0.36
RPAIN-213ENST00000573577 IFT88Q13099 833 aa12.83□□□□□ -0.36
RPAIN-213ENST00000573577 TRAF3Q13114 568 aa12.83□□□□□ -0.36
RPAIN-213ENST00000573577 CPSF6Q16630 551 aaKnown RBP eCLIP12.83□□□□□ -0.36
RPAIN-213ENST00000573577 TTC19Q6DKK2 380 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-213ENST00000573577 TRIM40Q6P9F5 258 aa12.83□□□□□ -0.36
RPAIN-213ENST00000573577 CHSY3Q70JA7 882 aa12.83□□□□□ -0.36
RPAIN-213ENST00000573577 COX15Q7KZN9 410 aa12.83□□□□□ -0.36
RPAIN-213ENST00000573577 OVCH1Q7RTY7 1134 aa12.83□□□□□ -0.36
RPAIN-213ENST00000573577 RAB43Q86YS6 212 aa12.83□□□□□ -0.36
RPAIN-213ENST00000573577 DTWD1Q8N5C7 304 aa12.83□□□□□ -0.36
RPAIN-213ENST00000573577 GOLGA6L1Q8N7Z2 621 aa12.83□□□□□ -0.36
RPAIN-213ENST00000573577 C9orf43Q8TAL5 461 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-213ENST00000573577 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-213ENST00000573577 GAL3ST3Q96A11 431 aa12.83□□□□□ -0.36
RPAIN-213ENST00000573577 MOCOSQ96EN8 888 aa12.83□□□□□ -0.36
RPAIN-213ENST00000573577 CMTM7Q96FZ5 175 aa12.83□□□□□ -0.36
RPAIN-213ENST00000573577 FAR2Q96K12 515 aa12.83□□□□□ -0.36
RPAIN-213ENST00000573577 REXO4Q9GZR2 422 aaKnown RBP12.83□□□□□ -0.36
RPAIN-213ENST00000573577 SLC25A18Q9H1K4 315 aa12.83□□□□□ -0.36
RPAIN-213ENST00000573577 SLC26A1Q9H2B4 701 aa12.83□□□□□ -0.36
RPAIN-213ENST00000573577 C12orf65Q9H3J6 166 aaKnown RBP12.83□□□□□ -0.36
RPAIN-213ENST00000573577 WDR54Q9H977 334 aa12.83□□□□□ -0.36
RPAIN-213ENST00000573577 CLK4Q9HAZ1 481 aaKnown RBP12.83□□□□□ -0.36
RPAIN-213ENST00000573577 TMBIM4Q9HC24 238 aa12.83□□□□□ -0.36
RPAIN-213ENST00000573577 ZNF282Q9UDV7 671 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-213ENST00000573577 TRPS1Q9UHF7 1281 aa12.83□□□□□ -0.36
RPAIN-213ENST00000573577 RNF11Q9Y3C5 154 aa12.83□□□□□ -0.36
RPAIN-213ENST00000573577 FER1L5A0AVI2 2057 aa12.83□□□□□ -0.36
RPAIN-213ENST00000573577 LRIT2A6NDA9 550 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 ARGFXA6NJG6 315 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 ERI3O43414 337 aaKnown RBP12.82□□□□□ -0.36
RPAIN-213ENST00000573577 KLHL18O94889 574 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 ZWINTO95229 277 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 UMODP07911 640 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 ZNF888P0CJ79 500 aaPredicted RBP12.82□□□□□ -0.36
RPAIN-213ENST00000573577 CREB1P16220 341 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 IL1RNP18510 177 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 OTX2P32243 289 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 NAGLUP54802 743 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 PKNOX1P55347 436 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 FOXL2P58012 376 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 NFATC3Q12968 1075 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 SSPNQ14714 243 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 PCLAFQ15004 111 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 ZRSR2Q15696 482 aaKnown RBP12.82□□□□□ -0.36
RPAIN-213ENST00000573577 NKG7Q16617 165 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 TMEM35AQ53FP2 167 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 TOR1AIP1Q5JTV8 583 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 CPZQ66K79 652 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 GPRIN3Q6ZVF9 776 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 RPS27LQ71UM5 84 aaKnown RBP12.82□□□□□ -0.36
RPAIN-213ENST00000573577 MRGPREQ86SM8 312 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 C10orf107Q8IVU9 208 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 HOMEZQ8IX15 550 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 AFAP1L2Q8N4X5 818 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 OR4F6Q8NGB9 312 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 OR9A4Q8NGU2 314 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 HUS1BQ8NHY5 278 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 UTP15Q8TED0 518 aaKnown RBP12.82□□□□□ -0.36
RPAIN-213ENST00000573577 ZNF473Q8WTR7 871 aaKnown RBP12.82□□□□□ -0.36
RPAIN-213ENST00000573577 ABHD17AQ96GS6 310 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 CDK15Q96Q40 435 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 TRMOQ9BU70 441 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 YIPF2Q9BWQ6 316 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 ROGDIQ9GZN7 287 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 ELOVL6Q9H5J4 265 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 KCNK9Q9NPC2 374 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 MKKSQ9NPJ1 570 aaPredicted RBP12.82□□□□□ -0.36
RPAIN-213ENST00000573577 C14orf105Q9NVL8 296 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 SLC17A7Q9P2U7 560 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 TRPC4Q9UBN4 977 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 CTSFQ9UBX1 484 aa12.82□□□□□ -0.36
RPAIN-213ENST00000573577 SNX6Q9UNH7 406 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms